Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1550058 |
| length | 317 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G1356067 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 25262947 ~ 25263263 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1550029 | lncRNA | downstream | 64228 | 25198473 ~ 25198719 (-) | True | G1356038 |
| TU1550008 | lncRNA | downstream | 97854 | 25160628 ~ 25165093 (-) | True | G1356017 |
| TU1549873 | lncRNA | downstream | 106698 | 25151662 ~ 25156249 (-) | True | kansl1a |
| TU1549880 | lncRNA | downstream | 111664 | 25151029 ~ 25151283 (-) | True | G1355897 |
| TU1549997 | lncRNA | downstream | 175287 | 25081217 ~ 25087660 (-) | True | G1356006 |
| TU1550062 | lncRNA | upstream | 4548 | 25267811 ~ 25268073 (-) | True | G1356071 |
| TU1550064 | lncRNA | upstream | 7593 | 25270856 ~ 25271375 (-) | True | G1356073 |
| TU1550067 | lncRNA | upstream | 14441 | 25277704 ~ 25277997 (-) | True | G1356076 |
| TU1550081 | lncRNA | upstream | 23164 | 25286427 ~ 25286701 (-) | True | G1356090 |
| TU1550096 | lncRNA | upstream | 32147 | 25295410 ~ 25295642 (-) | True | G1356105 |
| XM_036946598.1 | mRNA | downstream | 15295 | 25213926 ~ 25247652 (-) | True | acsl5 |
| XM_021565382.2 | mRNA | downstream | 106692 | 25096486 ~ 25156255 (-) | False | kansl1a |
| XM_021565384.2 | mRNA | downstream | 106693 | 25096486 ~ 25156254 (-) | False | kansl1a |
| XM_021565385.2 | mRNA | downstream | 106710 | 25096486 ~ 25156237 (-) | False | kansl1a |
| XM_021565387.2 | mRNA | downstream | 115087 | 25096486 ~ 25147860 (-) | False | kansl1a |
| XM_021567360.2 | mRNA | upstream | 105270 | 25368533 ~ 25385777 (-) | True | tectb |
| XM_021567335.2 | mRNA | upstream | 133266 | 25396529 ~ 25399484 (-) | True | LOC110492860 |
| trnac-gca-11 | mRNA | upstream | 293253 | 25556516 ~ 25556587 (-) | True | trnac-gca-11 |
| XM_021565399.2 | mRNA | upstream | 329602 | 25592865 ~ 25615004 (-) | True | LOC110491719 |
| XR_002468870.2 | mRNA | upstream | 384506 | 25647769 ~ 25655273 (-) | False | LOC110491723 |
| TU1549855 | other | downstream | 374303 | 24884866 ~ 24888644 (-) | True | LOC110491708 |
| TU1548732 | other | downstream | 1228537 | 24009875 ~ 24034410 (-) | True | LOC110492858 |
| TU1548290 | other | downstream | 1804400 | 23451825 ~ 23458547 (-) | True | G1354433 |
| TU1548204 | other | downstream | 1943555 | 23318569 ~ 23319392 (-) | True | G1354351 |
| TU1547563 | other | downstream | 2218186 | 23043249 ~ 23044761 (-) | True | G1353762 |
| TU1552022 | other | upstream | 1464032 | 26727295 ~ 26727828 (-) | True | G1357833 |
| TU1552016 | other | upstream | 1466041 | 26729304 ~ 26743455 (-) | False | LOC110491745 |
| TU1553460 | other | upstream | 1848520 | 27111783 ~ 27113401 (-) | False | G1359119 |
| TU1553462 | other | upstream | 1848971 | 27112234 ~ 27113401 (-) | True | G1359119 |
| TU1553687 | other | upstream | 2094021 | 27357284 ~ 27359562 (-) | True | G1359321 |
