Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1666532 |
| length | 1109 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 1 |
| gene id | otop1 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 47365071 ~ 47372581 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1666457 | lncRNA | upstream | 124281 | 47246876 ~ 47247152 (+) | True | G1456597 |
| TU1666399 | lncRNA | upstream | 171848 | 47199377 ~ 47199585 (+) | True | G1456539 |
| TU1666129 | lncRNA | upstream | 272268 | 47098965 ~ 47099165 (+) | True | G1456293 |
| TU1666127 | lncRNA | upstream | 274967 | 47096244 ~ 47096466 (+) | True | G1456291 |
| TU1666126 | lncRNA | upstream | 276088 | 47095139 ~ 47095345 (+) | True | G1456290 |
| TU1666533 | lncRNA | downstream | 148 | 47372689 ~ 47372813 (+) | True | G1456668 |
| TU1666536 | lncRNA | downstream | 4241 | 47376782 ~ 47378517 (+) | False | G1456670 |
| TU1666538 | lncRNA | downstream | 5150 | 47377691 ~ 47378473 (+) | False | G1456670 |
| TU1666542 | lncRNA | downstream | 5150 | 47377691 ~ 47378517 (+) | True | G1456670 |
| TU1666579 | lncRNA | downstream | 42071 | 47414612 ~ 47415612 (+) | True | G1456699 |
| XM_021568632.2 | mRNA | upstream | 9647 | 47352232 ~ 47361786 (+) | False | LOC110493987 |
| XM_021568630.2 | mRNA | upstream | 9647 | 47352247 ~ 47361786 (+) | True | LOC110493987 |
| XM_021568629.2 | mRNA | upstream | 30202 | 47328302 ~ 47341231 (+) | True | lyar |
| XM_021568627.2 | mRNA | upstream | 63244 | 47286927 ~ 47308189 (+) | False | LOC110493983 |
| XR_002469224.2 | mRNA | upstream | 63244 | 47286927 ~ 47308189 (+) | True | LOC110493983 |
| XM_021568635.2 | mRNA | downstream | 2095 | 47374636 ~ 47376700 (+) | True | LOC110493989 |
| XM_021568639.2 | mRNA | downstream | 355883 | 47728424 ~ 47742589 (+) | False | idh3b |
| XM_021568640.2 | mRNA | downstream | 355883 | 47728424 ~ 47743582 (+) | False | idh3b |
| XM_036949991.1 | mRNA | downstream | 355883 | 47728424 ~ 47743582 (+) | True | idh3b |
| XM_021568643.2 | mRNA | downstream | 371815 | 47744356 ~ 47790013 (+) | False | LOC110493993 |
| TU1666430 | other | upstream | 142637 | 47228219 ~ 47228796 (+) | True | G1456570 |
| TU1664577 | other | upstream | 1512932 | 45856249 ~ 45858501 (+) | True | G1454824 |
| TU1663824 | other | upstream | 2034910 | 45335294 ~ 45336523 (+) | True | G1454127 |
| TU1663743 | other | upstream | 2111862 | 45258475 ~ 45259571 (+) | True | G1454049 |
| TU1663604 | other | upstream | 2300508 | 45069971 ~ 45070925 (+) | True | G1453914 |
| TU1666845 | other | downstream | 432817 | 47805358 ~ 47807481 (+) | True | LOC100135862 |
| TU1666865 | other | downstream | 461039 | 47833580 ~ 47839370 (+) | True | G1456969 |
| TU1666965 | other | downstream | 658373 | 48030914 ~ 48036583 (+) | True | glrx |
| TU1667106 | other | downstream | 1016541 | 48389082 ~ 48424405 (+) | False | LOC110494013 |
| TU1668086 | other | downstream | 1320780 | 48693321 ~ 48721244 (+) | False | bsnb |
