Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1684530 |
| length | 255 |
| lncRNA type | sense_over |
| GC content | 0.53 |
| exon number | 2 |
| gene id | LOC110494308 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 62282838 ~ 62286838 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005000 | vasopressin receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1684491 | lncRNA | upstream | 67266 | 62214323 ~ 62215572 (+) | True | G1472883 |
| TU1684356 | lncRNA | upstream | 170110 | 62111611 ~ 62112728 (+) | False | G1472762 |
| TU1684357 | lncRNA | upstream | 170110 | 62111611 ~ 62112728 (+) | False | G1472762 |
| TU1684358 | lncRNA | upstream | 170110 | 62111611 ~ 62112728 (+) | False | G1472762 |
| TU1684361 | lncRNA | upstream | 170110 | 62111611 ~ 62112728 (+) | True | G1472762 |
| TU1684587 | lncRNA | downstream | 73522 | 62356922 ~ 62359002 (+) | True | G1472961 |
| TU1684592 | lncRNA | downstream | 84443 | 62367843 ~ 62369994 (+) | False | G1472966 |
| TU1684593 | lncRNA | downstream | 84443 | 62367843 ~ 62370614 (+) | True | G1472966 |
| TU1684701 | lncRNA | downstream | 268400 | 62551800 ~ 62552243 (+) | True | G1473067 |
| TU1684718 | lncRNA | downstream | 282349 | 62565749 ~ 62566066 (+) | True | G1473082 |
| XM_021567409.2 | mRNA | upstream | 28028 | 62251544 ~ 62254810 (+) | True | ghrl |
| NM_001124588.2 | mRNA | upstream | 28029 | 62251539 ~ 62254809 (+) | False | ghrl |
| XM_021567407.2 | mRNA | upstream | 28039 | 62210022 ~ 62254799 (+) | False | ghrl |
| XM_021567408.2 | mRNA | upstream | 28039 | 62210023 ~ 62254799 (+) | False | ghrl |
| XM_021567406.2 | mRNA | upstream | 28039 | 62244150 ~ 62254799 (+) | False | ghrl |
| XM_021569273.2 | mRNA | downstream | 122013 | 62405413 ~ 62417692 (+) | True | LOC110494317 |
| LOC110493234 | mRNA | downstream | 143144 | 62426544 ~ 62433065 (+) | True | LOC110493234 |
| XM_021569271.2 | mRNA | downstream | 188531 | 62471931 ~ 62491150 (+) | True | LOC110494314 |
| XM_021569274.2 | mRNA | downstream | 208571 | 62491971 ~ 62496531 (+) | True | LOC110494318 |
| XM_021567414.2 | mRNA | downstream | 223456 | 62506856 ~ 62528639 (+) | False | LOC100136666 |
| TU1684022 | other | upstream | 725800 | 61556319 ~ 61557038 (+) | True | LOC110494283 |
| TU1683229 | other | upstream | 1283775 | 60972478 ~ 60999063 (+) | True | G1471723 |
| TU1682011 | other | upstream | 2178831 | 60101892 ~ 60104007 (+) | False | G1470607 |
| TU1680364 | other | upstream | 3774953 | 58507297 ~ 58507885 (+) | True | G1469076 |
| TU1678198 | other | upstream | 4668538 | 57589865 ~ 57614300 (+) | True | G1467219 |
| TU1684810 | other | downstream | 415103 | 62698503 ~ 62698815 (+) | True | G1473171 |
| TU1684816 | other | downstream | 426939 | 62710339 ~ 62711136 (+) | True | G1473177 |
| TU1685904 | other | downstream | 933548 | 63216948 ~ 63217594 (+) | True | G1474159 |
| TU1686655 | other | downstream | 1375044 | 63658444 ~ 63663254 (+) | True | srsf3b |
| TU1686672 | other | downstream | 1400690 | 63684090 ~ 63688090 (+) | True | tmcc2 |
