Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1881247 |
| length | 720 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G1644523 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 59592943 ~ 59598448 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1881233 | lncRNA | upstream | 3393 | 59552061 ~ 59589550 (+) | False | G1644518 |
| TU1881234 | lncRNA | upstream | 3393 | 59552574 ~ 59589550 (+) | True | G1644518 |
| TU1881237 | lncRNA | upstream | 34478 | 59542730 ~ 59558465 (+) | False | G1644518 |
| TU1881236 | lncRNA | upstream | 39373 | 59542730 ~ 59553570 (+) | False | G1644518 |
| TU1881245 | lncRNA | upstream | 40971 | 59548670 ~ 59551972 (+) | True | G1644521 |
| TU1881340 | lncRNA | downstream | 56898 | 59655346 ~ 59656776 (+) | True | G1644603 |
| TU1881351 | lncRNA | downstream | 67316 | 59665764 ~ 59666169 (+) | True | G1644610 |
| TU1881302 | lncRNA | downstream | 86120 | 59684568 ~ 59686349 (+) | False | G1644572 |
| TU1881305 | lncRNA | downstream | 86120 | 59684568 ~ 59686349 (+) | True | G1644572 |
| TU1881377 | lncRNA | downstream | 100471 | 59698919 ~ 59704672 (+) | True | G1644635 |
| XM_021574870.2 | mRNA | upstream | 104549 | 59482942 ~ 59488394 (+) | False | rdh14a |
| XM_021574871.2 | mRNA | upstream | 104549 | 59482971 ~ 59488394 (+) | False | rdh14a |
| XM_021574872.2 | mRNA | upstream | 104549 | 59482971 ~ 59488394 (+) | True | rdh14a |
| XM_036955215.1 | mRNA | upstream | 365425 | 59220036 ~ 59227518 (+) | True | LOC110498210 |
| XM_021574835.2 | mRNA | upstream | 570624 | 59015463 ~ 59022319 (+) | True | LOC110498208 |
| XM_021574841.2 | mRNA | downstream | 141110 | 59739558 ~ 59760715 (+) | False | LOC110498214 |
| XM_021574844.2 | mRNA | downstream | 145776 | 59744224 ~ 59760715 (+) | True | LOC110498214 |
| XM_036955262.1 | mRNA | downstream | 175520 | 59773968 ~ 59799587 (+) | False | LOC110498234 |
| XM_036955264.1 | mRNA | downstream | 175520 | 59773968 ~ 59799587 (+) | False | LOC110498234 |
| XM_036955263.1 | mRNA | downstream | 190883 | 59789331 ~ 59799587 (+) | True | LOC110498234 |
| TU1880963 | other | upstream | 395930 | 59196684 ~ 59197013 (+) | True | G1644280 |
| TU1880791 | other | upstream | 535720 | 59054523 ~ 59057223 (+) | True | G1644123 |
| TU1879589 | other | upstream | 1294708 | 58293336 ~ 58298235 (+) | False | LOC110498189 |
| TU1879513 | other | upstream | 1416458 | 58164477 ~ 58176485 (+) | True | G1642993 |
| TU1879008 | other | upstream | 1910390 | 57656349 ~ 57682553 (+) | True | G1642565 |
| TU1881294 | other | downstream | 10152 | 59608600 ~ 59609394 (+) | True | G1644569 |
| TU1881400 | other | downstream | 149536 | 59747984 ~ 59748345 (+) | True | G1644651 |
| TU1882231 | other | downstream | 785073 | 60383521 ~ 60391663 (+) | True | LOC110498402 |
| TU1882250 | other | downstream | 800459 | 60398907 ~ 60402404 (+) | True | plaat1l |
| TU1882292 | other | downstream | 874675 | 60473123 ~ 60473880 (+) | False | chrna2a |
