Gene
RNA
| Item | Value |
|---|---|
| gene id | G1644523 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 59592943 ~ 59598448 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1881247 | True | 720 | lncRNA | 0.36 | 2 | 59592943 | 59598448 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rdh14a | LOC106607934 | coding | upstream | 104549 | 59482942 ~ 59488394 (+) |
| LOC110498210 | osr1 | coding | upstream | 365425 | 59220036 ~ 59227518 (+) |
| LOC110498208 | LOC106608166 | coding | upstream | 570624 | 59015463 ~ 59022319 (+) |
| prlh2r | LOC106608506 | coding | upstream | 688778 | 58895252 ~ 58904165 (+) |
| LOC110498202 | LOC106608562 | coding | upstream | 700202 | 58883806 ~ 58892741 (+) |
| LOC110498214 | LOC106607310 | coding | downstream | 141110 | 59739558 ~ 59760715 (+) |
| LOC110498234 | LOC106607246 | coding | downstream | 175520 | 59773968 ~ 59799587 (+) |
| ankef1b | LOC106609265 | coding | downstream | 216153 | 59814601 ~ 59839856 (+) |
| LOC110510484 | LOC106607199 | coding | downstream | 267144 | 59865592 ~ 59961717 (+) |
| LOC110498222 | LOC106603387 | coding | downstream | 398077 | 59996525 ~ 60022616 (+) |
| G1644521 | NA | non-coding | upstream | 40971 | 59548670 ~ 59551972 (+) |
| G1644551 | NA | non-coding | upstream | 56296 | 59536341 ~ 59536647 (+) |
| G1644547 | NA | non-coding | upstream | 72137 | 59520105 ~ 59520806 (+) |
| G1644539 | NA | non-coding | upstream | 90644 | 59502003 ~ 59502299 (+) |
| G1644534 | NA | non-coding | upstream | 96444 | 59496233 ~ 59496499 (+) |
| G1644603 | NA | non-coding | downstream | 56898 | 59655346 ~ 59656776 (+) |
| G1644610 | NA | non-coding | downstream | 67316 | 59665764 ~ 59666169 (+) |
| G1644572 | NA | non-coding | downstream | 86120 | 59684568 ~ 59686349 (+) |
| G1644635 | LOC106607662 | non-coding | downstream | 100471 | 59698919 ~ 59704672 (+) |
| G1644641 | NA | non-coding | downstream | 129180 | 59727628 ~ 59729262 (+) |
| G1644280 | NA | other | upstream | 395930 | 59196684 ~ 59197013 (+) |
| G1644123 | NA | other | upstream | 535720 | 59054523 ~ 59057223 (+) |
| LOC110498189 | klhdc1 | other | upstream | 1294708 | 58293310 ~ 58298259 (+) |
| G1642993 | LOC106611338 | other | upstream | 1416458 | 58164477 ~ 58176485 (+) |
| G1642565 | NA | other | upstream | 1910390 | 57656349 ~ 57682553 (+) |
| G1644569 | NA | other | downstream | 10152 | 59608600 ~ 59609394 (+) |
| G1644651 | NA | other | downstream | 149536 | 59747984 ~ 59748345 (+) |
| LOC110498402 | LOC106604468 | other | downstream | 785073 | 60382983 ~ 60392450 (+) |
| plaat1l | LOC106611413 | other | downstream | 800459 | 60398860 ~ 60402461 (+) |
| chrna2a | LOC103467111 | other | downstream | 874675 | 60462967 ~ 60475546 (+) |
