RNA id: XM_036958334.1


Basic Information

Item Value
RNA id XM_036958334.1
length 1011
RNA type mRNA
GC content 0.50
exon number 2
gene id LOC118942966
representative True

Chromosome Information

Item Value
chromosome id NC_048585.1
NCBI id CM023239.2
chromosome length 64935962
location 60778559 ~ 60779842 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

cagagagagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagagagagagagagaagagggagagagaggggaagaaagacagagagagagagagagagaaagaaagagggagagagaggggaagaaagacagagagagagagagagagagagaaagatggagagagaggggaagaaagacagagagagagagagggggagagagggagagagagggagagagagggagagagaggggaaagaaagacagagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagagaaggaagaaagacagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagagaaagagggagagaggggaagaagaagaaagcagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagaggggaagggggaaagggagaggggaagaaagacagagagagagagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagagagagagaaagagggagagagaggggaagaaagacagagagagagagagagagagaagaaagagggagagagaggggaagaaagacagagagagagagagagagagagaaagaggagagagaggggaagaaagacagagagagagagagagagagagggaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2014547 lncRNA upstream 13323 60764845 ~ 60765236 (+) True G1759257
TU2014546 lncRNA upstream 18884 60759335 ~ 60759675 (+) True G1759256
TU2014524 lncRNA upstream 41552 60736453 ~ 60737007 (+) True G1759237
TU2014437 lncRNA upstream 56793 60721279 ~ 60721766 (+) False G1759167
TU2014438 lncRNA upstream 56793 60721279 ~ 60721766 (+) True G1759167
TU2014558 lncRNA downstream 29985 60809827 ~ 60810059 (+) True G1759266
TU2014588 lncRNA downstream 81538 60861380 ~ 60861649 (+) True G1759290
TU2014571 lncRNA downstream 111600 60891442 ~ 60891901 (+) True G1759275
TU2014612 lncRNA downstream 133461 60913303 ~ 60926108 (+) True G1759307
TU2014614 lncRNA downstream 134209 60914051 ~ 60927064 (+) True G1759308
XM_036958333.1 mRNA upstream 4422 60749006 ~ 60774137 (+) True LOC118942965
XM_036958323.1 mRNA upstream 124453 60632412 ~ 60654106 (+) False LOC110500798
XM_036958331.1 mRNA downstream 22551 60802393 ~ 60803538 (+) True LOC118942963
XM_036958332.1 mRNA downstream 28643 60808485 ~ 60809684 (+) True LOC118942964
LOC110500905 mRNA downstream 120935 60900777 ~ 60924091 (+) True LOC110500905
XM_036958340.1 mRNA downstream 945983 61725825 ~ 61804491 (+) False LOC110531293
XR_005038445.1 mRNA downstream 1206624 61986466 ~ 61987704 (+) False LOC118942795
TU2014439 other upstream 56087 60722158 ~ 60722472 (+) True G1759168
TU2013946 other upstream 419208 60358830 ~ 60359351 (+) True G1758786
TU2013992 other upstream 425525 60351646 ~ 60353034 (+) False G1758818
TU2013968 other upstream 451939 60322215 ~ 60326620 (+) False G1758801
TU2014559 other downstream 30360 60810202 ~ 60810620 (+) True G1759267
TU2016357 other downstream 1955209 62735051 ~ 62741819 (+) True G1760504
TU2016469 other downstream 2031933 62811775 ~ 62814241 (+) True G1760587
TU2016581 other downstream 2093839 62873681 ~ 62889038 (+) True LOC110500953
TU2016622 other downstream 2211328 62991170 ~ 63000596 (+) False LOC110500813

Expression Profile