Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1991332 |
| length | 250 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1738831 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048585.1 |
| NCBI id | CM023239.2 |
| chromosome length | 64935962 |
| location | 41540893 ~ 41541142 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1991330 | lncRNA | upstream | 2199 | 41538492 ~ 41538694 (+) | True | G1738829 |
| TU1991325 | lncRNA | upstream | 5548 | 41527669 ~ 41535345 (+) | True | G1738824 |
| TU1990727 | lncRNA | upstream | 15074 | 41455556 ~ 41525819 (+) | True | G1738291 |
| TU1990740 | lncRNA | upstream | 60337 | 41473263 ~ 41480556 (+) | True | G1738303 |
| TU1990724 | lncRNA | upstream | 148240 | 41390347 ~ 41392653 (+) | False | G1738291 |
| TU1991416 | lncRNA | downstream | 179261 | 41720403 ~ 41720637 (+) | True | G1738892 |
| TU1991417 | lncRNA | downstream | 180538 | 41721680 ~ 41722008 (+) | True | G1738893 |
| TU1991453 | lncRNA | downstream | 227641 | 41768783 ~ 41769071 (+) | True | G1738924 |
| TU1991454 | lncRNA | downstream | 228359 | 41769501 ~ 41769847 (+) | True | G1738925 |
| TU1991612 | lncRNA | downstream | 237685 | 41778827 ~ 41787548 (+) | False | G1739070 |
| XM_021577811.2 | mRNA | upstream | 274526 | 41257323 ~ 41266367 (+) | True | LOC110500434 |
| XM_036957843.1 | mRNA | upstream | 293760 | 41224772 ~ 41247133 (+) | True | LOC110500837 |
| XM_021577806.2 | mRNA | upstream | 324904 | 41203290 ~ 41215989 (+) | False | prkd4 |
| XM_021577809.2 | mRNA | upstream | 324904 | 41203875 ~ 41215989 (+) | False | prkd4 |
| XM_021577808.2 | mRNA | upstream | 325148 | 41203290 ~ 41215745 (+) | False | prkd4 |
| LOC110500843 | mRNA | downstream | 43666 | 41584808 ~ 41601466 (+) | True | LOC110500843 |
| XM_036956508.1 | mRNA | downstream | 68108 | 41609250 ~ 41615747 (+) | True | LOC110500443 |
| XM_036957845.1 | mRNA | downstream | 101865 | 41643007 ~ 41672302 (+) | False | LOC110500439 |
| XM_036957846.1 | mRNA | downstream | 101865 | 41643007 ~ 41672302 (+) | False | LOC110500439 |
| XM_036957848.1 | mRNA | downstream | 101865 | 41643007 ~ 41672302 (+) | False | LOC110500439 |
| TU1990529 | other | upstream | 511757 | 41024710 ~ 41029136 (+) | True | G1738119 |
| TU1990461 | other | upstream | 543573 | 40993155 ~ 40997320 (+) | True | G1738057 |
| TU1990244 | other | upstream | 987040 | 40552011 ~ 40553853 (+) | True | G1737866 |
| TU1989857 | other | upstream | 1137208 | 40401504 ~ 40403685 (+) | True | LOC110500409 |
| TU1989649 | other | upstream | 1477568 | 40062706 ~ 40063325 (+) | True | G1737353 |
| TU1991654 | other | downstream | 347669 | 41888811 ~ 41891367 (+) | False | G1739103 |
| TU1991652 | other | downstream | 354187 | 41895329 ~ 41897856 (+) | True | G1739103 |
| TU1991899 | other | downstream | 743914 | 42285056 ~ 42288500 (+) | True | cxcl8c |
| TU1991912 | other | downstream | 813435 | 42354577 ~ 42355327 (+) | True | si:dkey-185m8.2 |
| TU1992021 | other | downstream | 960207 | 42501349 ~ 42502357 (+) | True | G1739440 |
