Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2076488 |
| length | 1137 |
| lncRNA type | read_through |
| GC content | 0.37 |
| exon number | 3 |
| gene id | gatd3a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45627869 ~ 45753090 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0005739 | mitochondrion | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2076483 | lncRNA | upstream | 6790 | 45620627 ~ 45621079 (+) | True | G1815066 |
| TU2076478 | lncRNA | upstream | 11174 | 45615307 ~ 45616695 (+) | True | G1815063 |
| TU2076475 | lncRNA | upstream | 12650 | 45613945 ~ 45615219 (+) | False | G1815063 |
| TU2076442 | lncRNA | upstream | 21430 | 45587741 ~ 45606439 (+) | True | LOC110501945 |
| TU2076412 | lncRNA | upstream | 70020 | 45556541 ~ 45557849 (+) | True | G1815022 |
| TU2076545 | lncRNA | downstream | 26995 | 45780078 ~ 45780517 (+) | False | G1815114 |
| TU2076546 | lncRNA | downstream | 26995 | 45780078 ~ 45780517 (+) | True | G1815114 |
| TU2077109 | lncRNA | downstream | 40081 | 45793164 ~ 45793435 (+) | True | G1815586 |
| TU2077114 | lncRNA | downstream | 43181 | 45796264 ~ 45796484 (+) | True | G1815588 |
| TU2077117 | lncRNA | downstream | 60873 | 45813956 ~ 45814168 (+) | True | G1815591 |
| XR_002470277.2 | mRNA | upstream | 21368 | 45587722 ~ 45606501 (+) | False | LOC110501945 |
| XM_036959600.1 | mRNA | upstream | 99976 | 45526288 ~ 45527893 (+) | False | LOC110502177 |
| XM_036959599.1 | mRNA | upstream | 114106 | 45511851 ~ 45513763 (+) | True | LOC118943643 |
| XM_036959414.1 | mRNA | upstream | 298828 | 45327109 ~ 45329041 (+) | True | LOC110502173 |
| XM_036959413.1 | mRNA | upstream | 360280 | 45262215 ~ 45267589 (+) | True | LOC110502139 |
| XM_021579815.2 | mRNA | downstream | 85652 | 45838735 ~ 45841019 (+) | False | LOC110501937 |
| XM_021579816.2 | mRNA | downstream | 85664 | 45838747 ~ 45841019 (+) | True | LOC110501937 |
| XM_021579817.2 | mRNA | downstream | 116225 | 45869308 ~ 45871541 (+) | True | LOC110501938 |
| XM_036959425.1 | mRNA | downstream | 179722 | 45932805 ~ 45940900 (+) | False | ercc1 |
| XM_021579826.2 | mRNA | downstream | 201280 | 45954363 ~ 45971125 (+) | True | LOC110501949 |
| TU2076385 | other | upstream | 100429 | 45521920 ~ 45527440 (+) | True | LOC110502177 |
| TU2076159 | other | upstream | 452397 | 45172975 ~ 45175472 (+) | True | LOC110501942 |
| TU2076178 | other | upstream | 516640 | 45110547 ~ 45111229 (+) | True | G1814811 |
| TU2074893 | other | upstream | 1053948 | 44566888 ~ 44573921 (+) | True | LOC110501918 |
| TU2074885 | other | upstream | 1119818 | 44498457 ~ 44508051 (+) | True | G1813665 |
| TU2076572 | other | downstream | 28416 | 45781499 ~ 45782536 (+) | True | G1815137 |
| TU2077403 | other | downstream | 405576 | 46158659 ~ 46169901 (+) | True | LOC110501947 |
| TU2077416 | other | downstream | 423524 | 46176607 ~ 46177757 (+) | True | G1815855 |
| TU2077678 | other | downstream | 581757 | 46334840 ~ 46335370 (+) | True | G1816074 |
| TU2077826 | other | downstream | 999808 | 46752891 ~ 46770563 (+) | True | G1816206 |
