Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2079326 |
| length | 391 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 2 |
| gene id | G1817376 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 47677276 ~ 47677970 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2079315 | lncRNA | downstream | 31497 | 47644370 ~ 47645779 (-) | True | G1817368 |
| TU2079300 | lncRNA | downstream | 61291 | 47615182 ~ 47615985 (-) | True | G1817353 |
| TU2079299 | lncRNA | downstream | 62857 | 47614216 ~ 47614419 (-) | True | G1817352 |
| TU2079284 | lncRNA | downstream | 100047 | 47576989 ~ 47577229 (-) | True | G1817341 |
| TU2079271 | lncRNA | downstream | 125545 | 47549821 ~ 47551731 (-) | True | G1817329 |
| TU2079332 | lncRNA | upstream | 5507 | 47683477 ~ 47712089 (-) | False | G1817380 |
| TU2079330 | lncRNA | upstream | 31634 | 47709604 ~ 47711113 (-) | False | G1817380 |
| TU2079331 | lncRNA | upstream | 31634 | 47709604 ~ 47711113 (-) | False | G1817380 |
| TU2079334 | lncRNA | upstream | 31634 | 47709604 ~ 47711113 (-) | True | G1817380 |
| TU2079363 | lncRNA | upstream | 51387 | 47729357 ~ 47730208 (-) | False | G1817406 |
| XM_021579839.2 | mRNA | downstream | 41636 | 47628880 ~ 47635640 (-) | True | LOC110501961 |
| XM_036959453.1 | mRNA | downstream | 44627 | 47628880 ~ 47632649 (-) | False | LOC110501961 |
| XM_036959450.1 | mRNA | downstream | 123667 | 47477628 ~ 47553609 (-) | False | cfap65 |
| XM_036959451.1 | mRNA | downstream | 123667 | 47477628 ~ 47553609 (-) | False | cfap65 |
| XM_036959449.1 | mRNA | downstream | 416810 | 47177045 ~ 47260466 (-) | False | trpm2 |
| XM_036959458.1 | mRNA | upstream | 55249 | 47733219 ~ 47834252 (-) | False | ptprna |
| XM_036959457.1 | mRNA | upstream | 55249 | 47733219 ~ 47834254 (-) | True | ptprna |
| XM_036959461.1 | mRNA | upstream | 219087 | 47897057 ~ 47972131 (-) | True | tmem198a |
| XM_021579829.2 | mRNA | upstream | 379881 | 48057851 ~ 48064453 (-) | False | LOC110501953 |
| XM_036959466.1 | mRNA | upstream | 461791 | 48139761 ~ 48220042 (-) | False | LOC110501956 |
| TU2079216 | other | downstream | 203892 | 47471294 ~ 47473384 (-) | True | G1817287 |
| TU2078705 | other | downstream | 275229 | 47401122 ~ 47402047 (-) | True | G1816929 |
| TU2078613 | other | downstream | 450630 | 47225551 ~ 47226646 (-) | True | G1816841 |
| TU2077141 | other | downstream | 1836294 | 45838750 ~ 45840982 (-) | True | G1815615 |
| TU2075825 | other | downstream | 3003388 | 44673447 ~ 44673888 (-) | True | G1814480 |
| TU2079567 | other | upstream | 384079 | 48062049 ~ 48063644 (-) | True | LOC110501953 |
| TU2079734 | other | upstream | 590817 | 48268787 ~ 48291496 (-) | True | G1817668 |
| TU2079931 | other | upstream | 781056 | 48459026 ~ 48460040 (-) | True | G1817836 |
| TU2080079 | other | upstream | 791628 | 48469598 ~ 48470035 (-) | True | G1817968 |
| TU2080196 | other | upstream | 949394 | 48627364 ~ 48627846 (-) | True | G1818059 |
