RNA id: TU2373190


Basic Information

Item Value
RNA id TU2373190
length 216
lncRNA type intronic
GC content 0.44
exon number 2
gene id G2075578
representative True

Chromosome Information

Item Value
chromosome id NC_048591.1
NCBI id CM023245.2
chromosome length 51556237
location 33629149 ~ 33629489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ggttaaagatgaaggggaggagacatgttaaagatgaaggagaggagacaggttaaagatgaaggggaggagacaggttaaagatgaaggagaggagacaggttaaagatgaaggggaggagacaggttaaatatgaagaagaggagacaggttaaagatgaaggaggggagacgggttaaagatgaaggagaggagacaggttaaagatgaagga

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU2373178 lncRNA upstream 18808 33609912 ~ 33610341 (+) True G2075566
TU2373170 lncRNA upstream 28004 33600598 ~ 33601145 (+) True G2075558
TU2373124 lncRNA upstream 100272 33528670 ~ 33528877 (+) True G2075516
TU2373123 lncRNA upstream 101202 33527677 ~ 33527947 (+) True G2075515
TU2373119 lncRNA upstream 107273 33521633 ~ 33521876 (+) True G2075511
TU2373198 lncRNA downstream 6791 33636280 ~ 33637909 (+) True G2075586
TU2373199 lncRNA downstream 7136 33636625 ~ 33636884 (+) True G2075587
TU2373205 lncRNA downstream 14424 33643913 ~ 33644294 (+) True G2075593
TU2373240 lncRNA downstream 64442 33693931 ~ 33694347 (+) True G2075626
TU2373266 lncRNA downstream 99726 33729215 ~ 33729671 (+) False G2075649
XM_021588436.2 mRNA upstream 433336 33184578 ~ 33195813 (+) False LOC110507999
XM_021588433.2 mRNA upstream 433336 33184579 ~ 33195813 (+) False LOC110507999
XM_021588435.2 mRNA upstream 433336 33184579 ~ 33195813 (+) False LOC110507999
XM_021588432.2 mRNA upstream 433336 33184581 ~ 33195813 (+) True LOC110507999
XM_021588431.2 mRNA upstream 447759 33158868 ~ 33181390 (+) True LOC110507998
LOC110507198 mRNA downstream 1132129 34761618 ~ 34766144 (+) True LOC110507198
XM_021587092.2 mRNA downstream 1192132 34821621 ~ 34827171 (+) False LOC110507199
XM_036965162.1 mRNA downstream 1192132 34821621 ~ 34827171 (+) True LOC110507199
XM_021587153.2 mRNA downstream 1232806 34862295 ~ 34863448 (+) True LOC110507268
LOC110507201 mRNA downstream 1234254 34863743 ~ 34864743 (+) True LOC110507201
TU2373116 other upstream 108145 33516241 ~ 33521004 (+) True G2075508
TU2372789 other upstream 638921 32988501 ~ 32990228 (+) True G2075208
TU2372519 other upstream 1005181 32623624 ~ 32623968 (+) True G2074973
TU2372396 other upstream 1040377 32528897 ~ 32588772 (+) False LOC110507985
TU2372178 other upstream 1164273 32464238 ~ 32464876 (+) True G2074650
TU2373306 other downstream 188043 33817532 ~ 33817988 (+) True G2075687
TU2373344 other downstream 269788 33899277 ~ 33899623 (+) True G2075724
TU2373037 other downstream 287259 33916748 ~ 33934901 (+) False robo1
TU2373636 other downstream 872760 34502249 ~ 34502705 (+) True G2076000
TU2373744 other downstream 1083087 34712576 ~ 34714556 (+) True G2076102

Expression Profile