Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU2417486 |
| length | 784 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G2114039 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048592.1 |
| NCBI id | CM023246.2 |
| chromosome length | 43716683 |
| location | 19472570 ~ 19473353 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU2417463 | lncRNA | upstream | 3726 | 19468577 ~ 19468844 (+) | True | G2114016 |
| TU2417434 | lncRNA | upstream | 63765 | 19408527 ~ 19408805 (+) | True | G2113990 |
| TU2417423 | lncRNA | upstream | 72328 | 19400026 ~ 19400242 (+) | True | G2113979 |
| TU2417191 | lncRNA | upstream | 78047 | 19391382 ~ 19394523 (+) | False | G2113766 |
| TU2417195 | lncRNA | upstream | 78047 | 19391664 ~ 19394523 (+) | True | G2113766 |
| TU2417523 | lncRNA | downstream | 57440 | 19530793 ~ 19531013 (+) | True | G2114074 |
| TU2417529 | lncRNA | downstream | 64533 | 19537886 ~ 19538323 (+) | True | G2114079 |
| TU2417525 | lncRNA | downstream | 70578 | 19543931 ~ 19546126 (+) | False | G2114076 |
| TU2417526 | lncRNA | downstream | 71601 | 19544954 ~ 19546126 (+) | True | G2114076 |
| TU2417583 | lncRNA | downstream | 167797 | 19641150 ~ 19642552 (+) | True | G2114128 |
| XM_021589408.2 | mRNA | upstream | 13950 | 19439625 ~ 19458620 (+) | True | LOC110508689 |
| XR_005040225.1 | mRNA | upstream | 17901 | 19439625 ~ 19454669 (+) | False | LOC110508689 |
| XM_021589407.2 | mRNA | upstream | 17903 | 19439625 ~ 19454667 (+) | False | LOC110508689 |
| XR_005040302.1 | mRNA | upstream | 21660 | 19450858 ~ 19450910 (+) | True | LOC118944897 |
| XM_021589403.2 | mRNA | upstream | 98002 | 19372009 ~ 19374568 (+) | True | LOC110508686 |
| XM_036966312.1 | mRNA | downstream | 57690 | 19531043 ~ 19542347 (+) | True | LOC110508179 |
| XM_021588702.2 | mRNA | downstream | 112740 | 19586093 ~ 19589514 (+) | True | LOC110508279 |
| XM_036966323.1 | mRNA | downstream | 150479 | 19623832 ~ 19636825 (+) | False | LOC110508695 |
| XM_021589419.2 | mRNA | downstream | 183672 | 19657025 ~ 19667196 (+) | False | LOC110508697 |
| XM_036966423.1 | mRNA | downstream | 183672 | 19657025 ~ 19667196 (+) | True | LOC110508697 |
| TU2416973 | other | upstream | 396152 | 19076077 ~ 19076418 (+) | True | G2113578 |
| TU2416413 | other | upstream | 804074 | 18667115 ~ 18668496 (+) | True | G2113059 |
| TU2415395 | other | upstream | 1568646 | 17903198 ~ 17903924 (+) | True | G2112127 |
| TU2414674 | other | upstream | 1716989 | 17754937 ~ 17755581 (+) | True | G2111491 |
| TU2414638 | other | upstream | 1763941 | 17708256 ~ 17708629 (+) | True | G2111457 |
| TU2417581 | other | downstream | 150115 | 19623468 ~ 19636753 (+) | True | LOC110508695 |
| TU2418949 | other | downstream | 968380 | 20441733 ~ 20442169 (+) | True | G2115369 |
| TU2419398 | other | downstream | 1367217 | 20840570 ~ 20842003 (+) | True | LOC110508722 |
| TU2420043 | other | downstream | 1901142 | 21374495 ~ 21375078 (+) | True | G2116347 |
| TU2422383 | other | downstream | 3607063 | 23080416 ~ 23087819 (+) | True | smg7 |
