Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00005409 |
| length | 1013 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 2 |
| gene id | XLOC_002924 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 35664129 ~ 35668584 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0032526 | response to retinoic acid | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050522-115 | Predicted to enable thiolester hydrolase activity. Predicted to be involved in response to retinoic acid. Predicted to be active in cytoplasm and nucleus. Orthologous to human OVCA2 (OVCA2 serine hydrolase domain containing). |
| ensembl_id | ENSDART00000167376 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005407 | lncRNA | downstream | 9449 | 35650584 ~ 35654680 (-) | False | XLOC_002923 |
| TCONS_00006091 | lncRNA | downstream | 232474 | 35429504 ~ 35431655 (-) | True | XLOC_002919 |
| TCONS_00005401 | lncRNA | downstream | 342492 | 35312892 ~ 35321637 (-) | True | XLOC_002917 |
| TCONS_00005392 | lncRNA | downstream | 499838 | 35160010 ~ 35164291 (-) | True | XLOC_002912 |
| TCONS_00006090 | lncRNA | downstream | 605685 | 35054281 ~ 35058444 (-) | True | XLOC_002909 |
| TCONS_00006092 | lncRNA | upstream | 143168 | 35811752 ~ 35964401 (-) | False | XLOC_002925 |
| TCONS_00006094 | lncRNA | upstream | 143168 | 35811752 ~ 36093493 (-) | False | XLOC_002925 |
| TCONS_00006093 | lncRNA | upstream | 143168 | 35811752 ~ 36093493 (-) | False | XLOC_002925 |
| TCONS_00006096 | lncRNA | upstream | 143168 | 35811752 ~ 36093533 (-) | False | XLOC_002925 |
| TCONS_00006095 | lncRNA | upstream | 143168 | 35811752 ~ 36093533 (-) | True | XLOC_002925 |
| TCONS_00005405 | mRNA | downstream | 50377 | 35584647 ~ 35613752 (-) | True | XLOC_002921 |
| TCONS_00005404 | mRNA | downstream | 122058 | 35537974 ~ 35542071 (-) | True | XLOC_002920 |
| TCONS_00005402 | mRNA | downstream | 253611 | 35367722 ~ 35410518 (-) | False | XLOC_002918 |
| TCONS_00005398 | mRNA | downstream | 406568 | 35250205 ~ 35257561 (-) | False | XLOC_002916 |
| TCONS_00005411 | mRNA | upstream | 536627 | 36205211 ~ 36207737 (-) | True | XLOC_002927 |
| TCONS_00005412 | mRNA | upstream | 543991 | 36212575 ~ 36214582 (-) | True | XLOC_002928 |
| TCONS_00005413 | mRNA | upstream | 548655 | 36217239 ~ 36220061 (-) | True | XLOC_002929 |
| TCONS_00005414 | mRNA | upstream | 552921 | 36221505 ~ 36223005 (-) | True | XLOC_002930 |
| TCONS_00005415 | mRNA | upstream | 555886 | 36224470 ~ 36225729 (-) | True | XLOC_002931 |
| TCONS_00005408 | other | downstream | 9775 | 35654245 ~ 35654354 (-) | True | XLOC_002923 |
| TCONS_00005406 | other | downstream | 43680 | 35620333 ~ 35620449 (-) | True | XLOC_002922 |
| TCONS_00005403 | other | downstream | 276887 | 35369837 ~ 35387242 (-) | True | XLOC_002918 |
| TCONS_00005381 | other | downstream | 671715 | 34984618 ~ 34992414 (-) | False | XLOC_002907 |
| TCONS_00005358 | other | downstream | 1336735 | 34327262 ~ 34327394 (-) | True | XLOC_002902 |
| TCONS_00005410 | other | upstream | 494595 | 36163179 ~ 36163294 (-) | True | XLOC_002926 |
| TCONS_00005427 | other | upstream | 819034 | 36487618 ~ 36502331 (-) | True | XLOC_002940 |
| TCONS_00005438 | other | upstream | 1013068 | 36681652 ~ 36682514 (-) | True | XLOC_002946 |
| TCONS_00005456 | other | upstream | 1683896 | 37352480 ~ 37357303 (-) | True | XLOC_002957 |
| TCONS_00005460 | other | upstream | 2383068 | 38051652 ~ 38051766 (-) | False | XLOC_002962 |
