RNA id: TCONS_00064257


Basic Information

Item Value
RNA id TCONS_00064257
length 6204
RNA type mRNA
GC content 0.46
exon number 40
gene id XLOC_033068
representative False

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 40745437 ~ 40756138 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTGGTGAATTATAACATCAAAATCAAGTCCTAAGAGTTGGTGCAAGACAAAGtgccACCATGAGTGGGGACCCAGAAATGGAGTGTTTTGGCCCGGCGGCCGTTTACCTCCGTAAACCAGAGAAGGAACGTATAGAAGCTCAGAATAGGCCGTTTGATGCTAAAACTGCTTATTTCGTGTCTGAACCCAAGGAGATGTACCTCAAAGGGGTCCTCAAGAGTAAGGAGGGCGGCAAAGCTACAGTGCAAACTCTCTGTGGCAAAACCCTCACAGTGAAGGAGGATGAAATCTTCCCAATGAATCCACCAAAGTTTGATAAGATTGAGGACATGGCCATGATGACCCACCTCAACGAACCCACCGTGCTGTACAACCTCAAAGAGCGTTATGCAGCATGGATGATCTACACCTACTCTGGGTTGTTCTGTGTCACCGTGAACCCCTATAAGTGGCTTCCAGTGTATGATGCTGTAGTTGTGTCAGGCTACAGGGGCAAGAAAAGAATTGAAGCCCCACCTCACATCTTCTCCATCTCTGACAATGCTTATCAATTCATGCTCACTGATCGTGAAAATCAGTCTATCCTGATTACTGGAGAATCTGGTGCAGGAAAGACTGTAAACACCAAACGTGTCATCCAGTACTTTGCGACAATCGCTGTGGCTGGCAAGCAGAAGCAAGAGCCTATTCCTGGAAAAATGCAGGGGTCGCTGGAGGATCAAATCATTGCAGCCAACCCCTTGCTGGAAGCCTATGGCAACGCCAAGACTGTGAGGAATGACAACTCTTCCCGCTTTGGTAAATTCATCCGAATTCATTTCGGCACCACTGGAAAACTGGCCTCGGCTGATATTGAAACTTATCTGCTGGAAAAGTCCAGGGTAACTTTCCAGTTGTCTGCTGAGAGGAGCTACCACATCTTCTACCAGCTGTGCACAGGCCATAAGCCAGAACTGCTGGAGGCTCTTCTGATCACCACTAACCCATACGACTATCCCATGATCAGTCAGGGTGAGATCACAGTCAAGAGCATCAACGATGTGGAAGAGTTCATTGCAACTGATACAGCCATTGATATTCTGGGCTTCAATGCTGAAGAGAAGGTAGGCATCTACAAGCTGACAGGAGCTGTGATGCATCATGGGAACATGAAGTTCAAGCAGAAGCAGAGGGAGGAGCAGGCTGAGCCTGATGGAACTGAGGTGGCTGATAAAATTGCTTACCTCTTGGGACTGAACTCTGCGGACATGCTGAAAGCTTTGTGTTATCCCAGAGTGAAGGTCGGGAATGAATTTGTGACCAAAGGTCAAACTGTTCCTCAGGTTAACAATGCAACCATGGCTCTGTGCAAGTCTGTCTATGAGAAGATGTTCTTGTGGATGGTTGTACGAATCAATGAGATGCTGGACACCAAACAGCCAAGACAGTTCTTCATCGGAGTGCTTGACATTGCAGGGTTTGAAATCTTTGATTTCAACAGCTTGGAGCAGCTTTGCATTAATTTCACCAATGAAAAACTGCAACAGTTTTTCAATCACCACATGTTTGTGCTGGAACAAGAGGAATACAAGAAAGAAGGTATTGAGTGGGAGTTCATTGACTTCGGTATGGACTTGGCTGCCTGCATTGAGCTGATTGAAAAGCCGATGGGCATTTTCTCCATCCTTGAGGAGGAGTGTATGTTCCCCAAGGCAACAGACACAACCTTCAAGAACAAGCTGCATGATCAGCATCTTGGTAAAACCAACTGCTTCCAGAAGCCCAAACCTGCCAAAGGCAAGGCTGAGGCTCACTTCTCCCTTGTGCACTATGCTGGAACTGTGGATTACAACATCTCAGGCTGGCTGGATAAGAACAAGGACCCCCTTAATGACTCTGTGGTTCAGCTGTACCAGAAGTCTTCAGTGAAGCTGTTGTGTCACCTGTATGCTGCTCATGCTTCAACAGAAGCTGAATCTGGTGGCAAAAAGGGTGGAAAAAAGAAGGGAGGCTCCTTCCAGACTGTGTCTGCTTTGTTCAGAGAAAATTTGGGCAAATTGATGACCAACCTGAGAAGCACTCATCCACATTTTGTGCGCTGCTTGATTCCAAATGAGTCAAAGACTCCAGGTCTTATGGAGAACTTTCTGGTCATCCACCAGTTGCGTTGTAATGGTGTGCTGGAGGGAATCAGAATTTGCAGAAAGGGTTTCCCCAGCAGAATCCTCTATGGTGACTTTAAGCAGAGATACAAAGTATTGAATGCTAGTGTCATCCCTGAGGGTCAGTTCATTGACAACAAGAAGGCTTCAGAGAAGCTTCTTGGCTCTATTGATGTGGATCATACCCAGTACAAGTTTGGACACACCAAGGTGTTCTTCAAAGCTGGTCTGCTGGGTACTCTTGAGGAAATGCGAGATGAGAAACTTGTTATCCTTGTAACCATGACTCAAGCAGTCTGCAGAGGCTACGTAATGAGGAAAGAGTTTGTCAAAATGATGGCGAGGAGAGAGTCCATCTACTCCATCCAGTACAACATCCGCTCATTCATGAATGTGAAACACTGGCCATGGATGAAGCTGTATTTTAAGATCAAGCCCCTGCTGAAGAGTGCAGAGACTGAGAAGGAAATGGCAGCCATGAAAGAAAACTTTGAAAAGATGAAAGAGGATCTTGCCAAAGCCCTTGCAAAGAAGAAGGAGCTGGAGGAGAAGATGGTCACCCTGCTGCAGGAGAAAAATGACCTGCAGTTACAAGTGGCATCTGAAACAGAAAACCTTTCTGATGCTGAGGAGAGATGTGAAGGACTAATCAAAAGCAAGATTCAGCTTGAGGCAAAACTTAAAGAGGCAACTGAAAGATTGGAGGATGAGGAAGAAATCAACGCTGAACTTACTGCCAAAAAGAGAAAGCTGGAGGACGAGTGCTCTGAGCTGAAGAAAGACATTGATGATTTAGAGCTTACCTTAGCCAAAGTAGAGAAAGAAAAACATGCCACTGAAAACAAGGTTAAAAACCTTACCGAAGAAATGACATCTCAAGATGAGGTTATTGTAAAGCTGACTAAAGAAAAGAAAGCCCTCCAAGAGGCACATCAGCAAACTTTGGATGATTTACAGGCAGAGGAAGACAAAGTCAATACTCTGACGAAAGCCAAAGCAAAGCTTGAGCAGCAAGTTGATGATCTGGAGGGATCTCTAGAGCAGGAAAAGAAACTACGTATGGACCTCGAGAGAGCCAAAAGAAAGCTTGAAGGTGATTTAAAACTTGCCCAGGAATCTTTAATGGACTTGGAAAATGACAAGCAGCAACTAGAAGAGAAATTGAAAAAGAAGGACTTTGAGACAAGTCAGTTTCTGAGCAGGATTGAAGATGAGCAATCTCTTGGTATTCAGTTCCAGAAAAAGATTAAAGAACTTCAGGCTCGCattgaggagctggaggaagaaaTCGAGGCAGAGCGAGCAGCTCGTGCTAAGGTCGAGAAGCAGCGATCTGATCTCGCCAGGGAACTTGAGGAGATCAGTGAGAGGCTTGAAGAAGCAGGTGGTGCCACCTCTGCCCAGATTGAGATGAACAAGAAACGTGAGGCTGAGTTCCAGAAACTGCGCCGCGATCTGGAGGAGTCCACCTTACAGCACGAAGCCACGGCTGCGGCACTCCGCAAGAAACAGGCTGACAGTGTGGCAGAGCTGGGAGAGCAGATCGACAACCTCCAGCGTGTGAAACAAAAGCTAGAAAAGGAGAAAAGTGAGCTTAAAATGGAGGTAGATGATGTGTCAAGCAGTATGGAGGCTGTTGCCAAATCCAAGACAAATCTTGAAAAGATGTGTCGTACACTGGAAGATCAGCTGAGTGAGTTTAAGTCGAAACATGACGAACATGTTCGCCACATCAATGACCTAAGTGCTCAAAAGGCAAGGCTTCAGACTGAAAACGGTGAAATGGGTCGTCAACTAGAGGAAAAAGAGTCTTTAGTTTCTCAGCTGACTCGAAGCAAACAGGCTTACACTCAACAGATTGAGGAGCTGAAGAGGCAAATTGAGGAAGAAGTCAAGGCCAAAAATTCCCTGGCACATGCTGTCCAATCATCACGACATGACTGTGATCTGCTCAGAGAGCAGTACGAGGAGGAACAGGAGGCCAAAGCTGAACTTCAGCGAAGCATGTCAAAGGCCAACAGTGAAGTAGCTCAATGGAGAACCAAATATGAGACCGATGCTATTCAGCGTACTGAAGAACTCGAGGAAGCAAAGAAAAAGCTTGCTCAGCGTTTGCAGGATGCAGAGGAGTCCATTGAGGCTGTGAATGCCAAATGTGCCTCTTTGGAAAAGACTAAGCAGCGACTGCAAAATGAAGTAGAAGATCTCATGATTGACGTTGAAAGAGCTAATGCTTTGGCTGCAAACCTTGACAAGAAACAAAGGAACTTTGACAAGGTCTTGGCCGAATGGAAGCAGAAGTATGAGGAGACCCAAGCAGAGCTGGAAGGAGCCCAGAAGGAGGCTCGCTCACTTAGCACGGaacttttcaaaatgaaaaattctTATGAGGAGACTTTGGATCATCTAGAAACTCTTAAGAGAGAGAACAAGAACCTTCAGCAGGAAATCACAGATTTAACCGAACAGCTTGGCGAGACTGGAAAGACCATCCATGAGCtggaaaaaggaaagaaaactgCAGAAATCGAAAAATCTGAAATCCAAGCTGCTCTTGAAGAAGCTGAGGCCACCTTAGAGCATGAGGAATCCAAGATTCTTCGCGTTCAGCTTGAACTGAACCAAGTGAAAGGAGAGATTGATCGGAAATTGGCCGAGAAGGATGAGGAGATTGAACAGATTAAGCGAAACAGCCAGAGGATCATCGACTCTATGCAGAGCACTCTGGATGCGGAAGTCAGAAGCAGAAACGATGCTCTGAGAATCAAAAAGAAGATGGAAGGAGACCTGAACGAGATGGAGATTCAGCTAAGCCATGCAAACCGGCAGGCAGCTGAAGCTCAGAAGCAGCTCAGGAACGTCCAAGGGCAACTCAAGGATGCTCAACTCCATCTTGATGAGGCTCTGAGGGCTCAAGAGGACATGAAAGAACAAGTTGCAATGGTTGAACGCAGGAATAACCTGATGCAGGCAGAGATCGAGGAGCTGAGAGTTGCTCTGGAGCAGACCGAGAGAGGCCGCAAAGTGGCTGAGCAGGAACTGGTGGATGCCAGTGAGCGAGTGACTCTCTTACACTCCCAAAACACCAGTCTTATTAACACCAAGAAAAAGCTGGAAGCAGATCTTGTTCAGATTCAAGGTGAGATGGAGGACGTGGTCCAGGAAGCTCGAAATGCTGAAGAGAAGGCAAAGAAAGCTATAACTGATgCCGCCATGATGGCAGAGGAGCTGAAGAAGGAGCAGGACACAAGCGCTCACCTTGAGAGGATGAAGAAGAATCTGGAGGTTACAGTCAAAGACCTGCAGCACCGTCTGGATGAGGCTGAGAGTCTGGCTATGAAGGGTGGAAAGAAGCAGCTCCAGAAGCTGGAGGCCAGAGTTCGTGAACTGGAGAGTGAAGTCGAAGCTGAACAGAGACGTGGTGCTGATGCTGTGAAAGGAGTCCGCAAATATGAAAGAAGAGTGAAGGAACTGACTTATCAGACTGAGGAAGATAAGAAGAATATTATTAGACTGCAAGACCTTGTGGACAAACTTCAACTGAAAGTCAAGGCCTACAAGCGACAGAGTGAAGATGCTGAGGAACAAGCCAATACTCACCTGACCAGATTCAGGAAGGTGCAGCATGAGCTGGAGGAGGCTCAGGAGAGAGCTGACATCGCCGAGTCCCAGGTCAACAAGCTCAGAGCTAAAAGCCGTGAATTTGGAAAGGGTAAAGAGGCTGAGGAGTAAACTCTCTGAGTAGGAAACTGGGCAAAGAAACAAGAACTCATACAATATGAAATCCTTGTCAAATGTCCACAAGAAGTAGCTAATAAAATGATATGACCTGAGGTGTTTGTGTACTGAATATTTTGTTACATTTCTGTCAATAATGTGTACATGATGTGTCGAAACATAAGAAGCCTTTTTGTGAGACAGTTTAGCATAACAGCTTAAAATGTGGTAAATTAATCACAATGTTGTTTCTGACAGACCTAGCTCTACTTACCTGAAATCCATATTAGCATCCAGGAAATGACAAACATTATCCCCAAACCACCAATTATTAGAGAGACTTTAA

Function

GO:

id name namespace
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-081124-1 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Human ortholog(s) of this gene implicated in arthrogryposis multiplex congenita; disease of cellular proliferation; and muscle tissue disease (multiple). Orthologous to several human genes including MYH1 (myosin heavy chain 1) and MYH4 (myosin heavy chain 4).

Ensembl:

ensembl_id ENSDART00000026257

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00065212 lncRNA downstream 84113 40659954 ~ 40661324 (-) True XLOC_033061
TCONS_00065211 lncRNA downstream 86337 40654032 ~ 40659100 (-) False XLOC_033057
TCONS_00065210 lncRNA downstream 116276 40625631 ~ 40629161 (-) True XLOC_033056
TCONS_00065209 lncRNA downstream 116315 40625631 ~ 40629122 (-) False XLOC_033056
TCONS_00064236 lncRNA downstream 172205 40572675 ~ 40573232 (-) False XLOC_033053
TCONS_00065213 lncRNA upstream 100230 40856139 ~ 40863887 (-) False XLOC_033074
TCONS_00065214 lncRNA upstream 100230 40856139 ~ 40864078 (-) False XLOC_033074
TCONS_00065215 lncRNA upstream 104387 40860296 ~ 40863721 (-) True XLOC_033074
TCONS_00065216 lncRNA upstream 207777 40963686 ~ 40968341 (-) True XLOC_033077
TCONS_00064283 lncRNA upstream 270319 41026228 ~ 41028618 (-) True XLOC_033080
TCONS_00064254 mRNA downstream 711 40730869 ~ 40744726 (-) False XLOC_033066
TCONS_00064255 mRNA downstream 717 40734100 ~ 40744720 (-) True XLOC_033066
TCONS_00064252 mRNA downstream 22957 40715637 ~ 40722480 (-) False XLOC_033065
TCONS_00064253 mRNA downstream 23237 40717816 ~ 40722200 (-) True XLOC_033065
TCONS_00064250 mRNA downstream 32233 40707162 ~ 40713204 (-) False XLOC_033064
TCONS_00064259 mRNA upstream 5717 40761626 ~ 40768726 (-) False XLOC_033067
TCONS_00064260 mRNA upstream 6520 40762429 ~ 40768654 (-) False XLOC_033067
TCONS_00064262 mRNA upstream 13608 40769517 ~ 40771813 (-) True XLOC_033069
TCONS_00064264 mRNA upstream 66678 40822587 ~ 40832245 (-) True XLOC_033071
TCONS_00064265 mRNA upstream 85247 40841156 ~ 40842768 (-) True XLOC_033072
TCONS_00064247 other downstream 77974 40667347 ~ 40667463 (-) True XLOC_033062
TCONS_00064244 other downstream 87765 40654729 ~ 40657672 (-) True XLOC_033057
TCONS_00064246 other downstream 89149 40656204 ~ 40656288 (-) True XLOC_033060
TCONS_00064245 other downstream 89352 40656003 ~ 40656085 (-) True XLOC_033059
TCONS_00064243 other downstream 92199 40653129 ~ 40653238 (-) True XLOC_033058
TCONS_00064261 other upstream 6848 40762757 ~ 40767671 (-) True XLOC_033067
TCONS_00064263 other upstream 39989 40795898 ~ 40819766 (-) True XLOC_033070
TCONS_00064277 other upstream 190448 40946357 ~ 40946475 (-) True XLOC_033076
TCONS_00064287 other upstream 324388 41080297 ~ 41085447 (-) False XLOC_033082
TCONS_00064312 other upstream 1653548 42409457 ~ 42418108 (-) False XLOC_033096

Expression Profile

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