RNA id: TU123769


Basic Information

Item Value
RNA id TU123769
length 200
lncRNA type sense_over
GC content 0.50
exon number 2
gene id G91958
representative False

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 337408 ~ 447161 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtctgtgtgtctgtctgtctgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtctgtctgtctgtctgtctgtgtgtgtgtctgtctgtctgtctgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtgtgtgtgtctgtgtctgtgtgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU123782 lncRNA downstream 11060 351743 ~ 353360 (-) True G91963
TU123783 lncRNA downstream 11060 352546 ~ 353360 (-) False G91963
TU123759 lncRNA downstream 57777 306234 ~ 306643 (-) True G91949
TU123751 lncRNA downstream 70480 286718 ~ 293940 (-) True G91943
TU123757 lncRNA downstream 93638 268885 ~ 270782 (-) True G91948
TU123816 lncRNA upstream 54531 501692 ~ 520861 (-) True G91990
TU123818 lncRNA upstream 61988 509149 ~ 619607 (-) True G91991
TU123821 lncRNA upstream 62300 509461 ~ 510110 (-) True G91992
TU123832 lncRNA upstream 110843 558004 ~ 558829 (-) True G92000
TU123833 lncRNA upstream 119781 566942 ~ 570740 (-) False G92001
XM_039811442.1 mRNA upstream 94877 542038 ~ 549410 (-) True LOC120565555
XM_039811996.1 mRNA upstream 106546 553707 ~ 566714 (-) True LOC120565889
XM_039811443.1 mRNA upstream 149076 596237 ~ 635055 (-) True patj
XM_039811899.1 mRNA upstream 258706 705867 ~ 707328 (-) True LOC120565843
XM_039811898.1 mRNA upstream 260873 708034 ~ 710213 (-) False LOC120565842
TU123743 other downstream 91754 178709 ~ 272666 (-) True G91938
TU123744 other downstream 91754 178709 ~ 272666 (-) False G91938
TU123726 other downstream 254225 109660 ~ 110195 (-) True G91929
TU123702 other downstream 282546 80795 ~ 81874 (-) True G91909
TU123830 other upstream 106572 553733 ~ 566721 (-) False LOC120565889
TU123850 other upstream 236798 683959 ~ 684519 (-) True G92012
TU124370 other upstream 528108 975269 ~ 982737 (-) False LOC120565586
TU124371 other upstream 528134 975295 ~ 982737 (-) False LOC120565586
TU124422 other upstream 656031 1103192 ~ 1129854 (-) False LOC120565934

Expression Profile