RNA id: TU124614


Basic Information

Item Value
RNA id TU124614
length 2353
lncRNA type read_through
GC content 0.33
exon number 7
gene id G92501
representative True

Chromosome Information

Item Value
chromosome id NC_053120.1
NCBI id CM020917.1
chromosome length 41568296
location 1925990 ~ 2016043 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtagtagtagtagtagtagtagataactttattgtcccttgGGGGCAGTTGGGTTTGTGGCACAATCGCAAGGCACTTCATGAcaagacatcagacatatgatccAAACAcagtccttacatcagacacCGACACACATAACATGAAgaatatacatcacacactacaatacactacaacacactacaatacactacaacacactataacacactataacacactacaatacactacaacacactacaacacactacaacacactataacacactataacacactataacacactataacacactataatacactataacacactataatacactataatacactataacacactataatacactataatacactataacacactataacacactacaacacactacaacacactataacacactataacacactataacacactataacacactataacacactataacacactataacacactacaacacactacaacacactacaacacactacaacacactataacacactacaacacactacaacacactacaacacactataacacactataacacactataacacactataacacactataacacactataacacactataacacactataacacactacaatacactacaatacactataacacactataacacaATACAatacactacaatacactacaacacactataacacactataacacactataacacactataatacactacaacacactataacacactataatacactataacacactataatacactataacacactataatacactacaacacactataacacactataacacactataacacactataacacactataacacactacaacacactacaacacactataacacactataacacactataacacactataacacactataacacactataacacactataacacactataacacactataacacactataacacactacaacacactataacacactataacacactataacacactataacacactataacacactataacacactataatacactataatacactataacacactataacacactataatacACTATAATACACTAGAACACACTAGAACACACTagaacacactataacacactataacacactataacacactataatacactataacacactataacacactataatacactataacacactacaacacactataacacactataacacactacaacacactataacacactacaatacactagAACACACTagaacacactataacacactataatacactataacacactataacacactataacacactataacacactagaacacactataacacactataacacactataacacactataatacactataatacactataacacactataacacactataacacactataacacactacaacacactataacacactacaatacactataacacactataatacactagaacacactataacacactataacacactataacacactataacacactacaacacactaGAACACACTATaatacactataacacactataacacactataatacactataacacactataacacactataacacactagaacacactataacacactataacacactataacacactataatacactagaacacactataacacactataacacactagaacacactataacacactagaACACACTagaacacactataacacactataacacactataacacactacaacacactataatacactataacacactataatacactataatacactataacacactataacacactataacacactataatacACTATAATACACTATAATACACTATAATACACTAGAACACACTATAATACACTATAATACACTATAATACACTAGAACACACTATaatacactataacacactataacacactataatacactataacacactataatacACTATAATACACTATAATACACTataacacactagaACACACTAGAACACACTAGAACACACTAgaacacactacaacacactacaacacactaGAACACACTAGAACACACTAGAACACACTAGAACACACTAGAACACACTAGAACACACCCTTGGGTGGGACCAGGCCAGCTGGACCACTAAGCTTTAGCTTATTCTGACTGATTTGAGGCTTTATGGCTCGTGGTTGGATGTGTTCGTGGTCAGAAGGGGCAGGAAGAAACGAGGCCTAGATGGCAGTAGTTTAACCTGAGATGGGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124528 lncRNA downstream 11567 1898546 ~ 1914423 (-) True G92447
TU124523 lncRNA downstream 12953 1908473 ~ 1913037 (-) True G92445
TU124524 lncRNA downstream 16501 1909238 ~ 1909489 (-) False G92445
TU124609 lncRNA downstream 28943 1896673 ~ 1897047 (-) True G92498
XR_005640240.1 lncRNA downstream 101744 1815893 ~ 1824246 (-) True LOC120565417
TU124581 lncRNA upstream 3132 2019175 ~ 2061283 (-) False G92487
TU124622 lncRNA upstream 6310 2022353 ~ 2025713 (-) True G92502
TU124584 lncRNA upstream 11490 2027533 ~ 2048577 (-) True G92488
TU124585 lncRNA upstream 29719 2045762 ~ 2048577 (-) False G92488
TU124651 lncRNA upstream 38516 2054559 ~ 2056284 (-) True G92518
XM_039811219.1 mRNA downstream 67999 1837537 ~ 1857991 (-) True LOC120565418
XM_039811215.1 mRNA downstream 320024 1584750 ~ 1605966 (-) True si:ch211-1a19.3
XM_039811216.1 mRNA downstream 320025 1583388 ~ 1605965 (-) False si:ch211-1a19.3
XM_039811217.1 mRNA downstream 464041 1456573 ~ 1461949 (-) True LOC120565409
XM_039811214.1 mRNA downstream 497259 1422218 ~ 1428731 (-) False LOC120565407
XM_039811237.1 mRNA upstream 10344 2026387 ~ 2028279 (-) True s1pr1
XM_039811249.1 mRNA upstream 47623 2063666 ~ 2087124 (-) True slc30a7
XM_039811468.1 mRNA upstream 118518 2134561 ~ 2163094 (-) True LOC120565577
XM_039811226.1 mRNA upstream 437276 2453319 ~ 2456640 (-) True LOC120565424
XM_039811227.1 mRNA upstream 437276 2453319 ~ 2456299 (-) False LOC120565424
TU124522 other downstream 12953 1893688 ~ 1913037 (-) False G92445
TU124597 other downstream 35285 1888362 ~ 1890705 (-) False G92495
TU124644 other upstream 11088 2027131 ~ 2031057 (-) False s1pr1
TU124656 other upstream 60799 2076842 ~ 2087097 (-) False slc30a7
TU124674 other upstream 272232 2288275 ~ 2307309 (-) True G92535
TU124728 other upstream 344948 2360991 ~ 2361662 (-) True G92564
TU124734 other upstream 350109 2366152 ~ 2368010 (-) False G92565

Expression Profile