RNA id: TU201393



Basic Information


Item Value
RNA id TU201393
length 245
lncRNA type read_through
GC content 0.44
exon number 2
gene id G148917
representative True

Chromosome Information


Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 33986395 ~ 34004225 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ctttggtgtaaaaacacattaagtcattttacggCACGATTTTGAATGATGACCATTCCCTGTAAATAAGGGCTCCTCCTCCCTGCCAAAGCCAATTTAACCACTGCCTAACCTTAAAACGTTAACATTTCCCACCGAGCATTAGTATGAGCTTCTACACCACTACCAAGgtaTAAAACAGCACCACACCTCCACGGTAGCATCacgagggtccctacatgtaaacagaagcattgagaactgtG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU201354 lncRNA downstream 24645 33953373 ~ 33961750 (-) True G148892
TU201391 lncRNA downstream 37497 33948391 ~ 33948898 (-) True G148915
TU201389 lncRNA downstream 57311 33927611 ~ 33929084 (-) True G148913
TU201382 lncRNA downstream 70168 33915598 ~ 33916227 (-) True G148909
XR_005641521.1 lncRNA downstream 164211 33807794 ~ 33822184 (-) True LOC120572957
TU201362 lncRNA upstream 10534 34014759 ~ 34080649 (-) False G148892
TU201355 lncRNA upstream 11290 34015515 ~ 34054107 (-) False G148892
TU201359 lncRNA upstream 11290 34015515 ~ 34080649 (-) False G148892
TU201365 lncRNA upstream 78237 34082462 ~ 34175847 (-) True LOC120572812
TU201374 lncRNA upstream 120177 34124402 ~ 34127073 (-) True G148902
XM_039822268.1 mRNA downstream 38484 33937090 ~ 33947911 (-) True LOC120572813
XM_039822167.1 mRNA downstream 289148 33670442 ~ 33697247 (-) True LOC120572751
XM_039822168.1 mRNA downstream 289148 33670667 ~ 33697247 (-) False LOC120572751
XM_039822453.1 mRNA downstream 344353 33637494 ~ 33642042 (-) False LOC120572928
XM_039821944.1 mRNA upstream 4541 34008766 ~ 34028312 (-) True LOC120572621
XM_039822293.1 mRNA upstream 42012 34046237 ~ 34193592 (-) False LOC120572826
XM_039822295.1 mRNA upstream 42012 34046237 ~ 34075514 (-) False LOC120572826
XM_039822294.1 mRNA upstream 42012 34046237 ~ 34052914 (-) True LOC120572826
XM_039822296.1 mRNA upstream 42595 34046820 ~ 34193595 (-) False LOC120572826
TU201330 other downstream 197020 33724665 ~ 33789375 (-) False G148879
TU201327 other downstream 197020 33788595 ~ 33789375 (-) False G148879
TU201333 other downstream 197020 33788595 ~ 33789375 (-) True G148879
TU201334 other downstream 197020 33788595 ~ 33789375 (-) False G148879
TU200929 other downstream 488379 33496634 ~ 33498016 (-) False LOC120572843
TU201394 other upstream 16347 34020572 ~ 34021079 (-) True G148918
XR_005641496.1 other upstream 160902 34165127 ~ 34176045 (-) False LOC120572812
XR_005641508.1 other upstream 347807 34352032 ~ 34353438 (-) False LOC120572901
TU201452 other upstream 409055 34413280 ~ 34419912 (-) False LOC120572624
TU201453 other upstream 409055 34413280 ~ 34419912 (-) True LOC120572624

Expression Profile