RNA id: TU203299


Basic Information

Item Value
RNA id TU203299
length 377
lncRNA type intronic
GC content 0.49
exon number 2
gene id G150246
representative True

Chromosome Information

Item Value
chromosome id NC_053125.1
NCBI id CM020922.1
chromosome length 39125861
location 38886799 ~ 38887329 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTGGGCAACAAGTTCATGGACGACggggagacaacacacacacacacacaggcacagagacacacattttctcacacacaggcagagacacacactcacagacacacattttctcacacacacatacaagcacagagacacacattttctcacacacacacacacaggcagagacacactcacagacacacattttctcacacacaggcacagagacagacgcacacagacacacacacaggcacagagatgcacattttctcacacacacacacacacaagcagacacactcacagacacacattttctcacacacacaggcacagagatgcacattttctcacacacacaggcagagacacactcacagacacac

Function

GO: NA

KEGG:

id description
ko00140 Steroid hormone biosynthesis
ko04913 Ovarian steroidogenesis

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU203280 lncRNA downstream 11971 38847658 ~ 38874828 (-) True G150230
TU203292 lncRNA downstream 33935 38852348 ~ 38852864 (-) False G150242
TU203293 lncRNA downstream 33935 38852348 ~ 38852864 (-) True G150242
TU203294 lncRNA downstream 34125 38852348 ~ 38852674 (-) False G150242
TU203282 lncRNA downstream 60074 38777613 ~ 38826725 (-) True G150232
TU203307 lncRNA upstream 48058 38935387 ~ 38936032 (-) True G150251
TU203311 lncRNA upstream 65325 38952654 ~ 38958522 (-) True G150253
TU203321 lncRNA upstream 213372 39100701 ~ 39102355 (-) True G150262
XM_039821590.1 mRNA downstream 20017 38828560 ~ 38866782 (-) True LOC120572318
XM_039821589.1 mRNA downstream 70117 38793562 ~ 38816682 (-) True cfi
XM_039821436.1 mRNA downstream 143409 38735184 ~ 38743390 (-) True LOC120572225
XM_039821286.1 mRNA downstream 214986 38645709 ~ 38671813 (-) False lratb.1
XM_039821973.1 mRNA downstream 251223 38628024 ~ 38635576 (-) False LOC120572655
XM_039821591.1 mRNA upstream 1566 38888895 ~ 38899886 (-) True LOC120572319
XM_039823584.1 mRNA upstream 17523 38904852 ~ 38914929 (-) True wdr55
XM_039823151.1 mRNA upstream 227116 39114445 ~ 39124082 (-) True LOC120573427
TU203233 other downstream 197206 38611655 ~ 38689593 (-) True G150192
TU203245 other downstream 218828 38644566 ~ 38667971 (-) True lratb.1
TU203220 other downstream 251206 38627757 ~ 38635593 (-) True LOC120572655
TU203219 other downstream 253747 38561269 ~ 38633052 (-) False LOC120572655
TU203204 other downstream 345629 38487968 ~ 38541170 (-) False LOC120572653

Expression Profile