RNA id: TU231512



Basic Information


Item Value
RNA id TU231512
length 691
RNA type TUCP
GC content 0.51
exon number 2
gene id G170802
representative True

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 34308994 ~ 34309714 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTAACTTGGTAACTTGCTATGGTGCATGTGTGCAAATCAGTACCAAGGTGCAAAGGAGAGTTCCAGTTTAGTAGCACAGACTAACATTTATTAACATTTAGTTTAAACAAAATGGCAGGCTACAGTTCCAAGACATTTCGTTCTCTTTAAAAACCGGCAATGGTGCAAAAATCAAAGCAGCCTACATCCGACATATGAGGACCCGGGGATGAGGGTTTAAAGAAAGTCTTGGCGGTGATTTAGTGACCGTTGTCCCCCTGTGTCTAGACTCGGCTAAGTCTCTATTTGGAGCTGGTGTACTTGGTCACGGCCTTGGTGCCTTCAGACACGGCATGTTTGGCCAGCTCCCCGGGCAGCAGCAGGCGGACCGCGGTCTGGATCTCCCTGGAGGTGATGGTGGACCTCTTGTTGTAGTGCGCCAGGCGCGACGCTTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAAAGAGTTCATGATGCCCATGGCCTTGGAGGAGATCCCCGTGTCTGGGTGCACCTGCTTCAGCACCTTATACACATAAATGGCATAGCTTTCCTTCCTGGTCTTGCGACGCTTTTTGCCTCCTTTCTTCTGTGTTTTGGTCACGGCCTTTTTGGAGCCCTTCTTTGGCGCAGGAGCAGATTTTGCAGGATCAGGCATTTTCTCTTCGGTGTAAACGCCAGGGAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU231500 lncRNA downstream 73457 34233915 ~ 34235537 (-) True G170793
TU231401 lncRNA downstream 85768 34220652 ~ 34223226 (-) True G170709
XR_005636404.1 lncRNA downstream 169101 34137920 ~ 34139893 (-) True LOC120543853
TU231388 lncRNA downstream 201191 34107514 ~ 34107803 (-) True G170696
TU231377 lncRNA downstream 729250 33568621 ~ 33579744 (-) True ntm
XR_005636379.1 lncRNA upstream 102088 34411802 ~ 34413193 (-) True LOC120543660
TU231599 lncRNA upstream 390182 34699896 ~ 34700115 (-) True G170830
TU231681 lncRNA upstream 613686 34923400 ~ 34931706 (-) False cblb
TU231683 lncRNA upstream 730094 35039808 ~ 35040363 (-) True G170897
TU231706 lncRNA upstream 771525 35081239 ~ 35090028 (-) True G170906
XM_039778294.1 mRNA downstream 159 34307928 ~ 34308835 (-) True LOC120544499
XM_039777126.1 mRNA downstream 8865 34284561 ~ 34300129 (-) True LOC120543837
XM_039777127.1 mRNA downstream 14566 34284561 ~ 34294428 (-) False LOC120543837
XM_039777123.1 mRNA downstream 14566 34284561 ~ 34294428 (-) False LOC120543837
XM_039777125.1 mRNA downstream 14566 34284561 ~ 34294428 (-) False LOC120543837
XM_039777605.1 mRNA upstream 23176 34332890 ~ 34356272 (-) True hyou1
XM_039777787.1 mRNA upstream 47425 34357139 ~ 34378936 (-) True vps11
XM_039777670.1 mRNA upstream 70531 34380245 ~ 34410183 (-) False LOC120544103
XM_039777669.1 mRNA upstream 70531 34380245 ~ 34410166 (-) False LOC120544103
XM_039777674.1 mRNA upstream 70531 34380245 ~ 34408551 (-) False LOC120544103
XR_005636560.1 other downstream 27977 34280925 ~ 34281017 (-) True LOC120544757
XR_005636561.1 other downstream 29600 34279302 ~ 34279394 (-) True LOC120544758
TU231185 other downstream 1817689 32443286 ~ 32491305 (-) True LOC120543978
TU231114 other downstream 2106788 32201709 ~ 32202206 (-) True G170463
TU230664 other downstream 3350496 30957501 ~ 30958498 (-) True G170098
XR_005636548.1 other upstream 1428279 35737993 ~ 35738183 (-) True LOC120544743
XR_005636576.1 other upstream 1428755 35738469 ~ 35738586 (-) True LOC120544776
XR_005636552.1 other upstream 1429275 35738989 ~ 35739181 (-) True LOC120544747
XR_005636565.1 other upstream 1429746 35739460 ~ 35739576 (-) True LOC120544762
XR_005636555.1 other upstream 1430271 35739985 ~ 35740171 (-) True LOC120544750

Expression Profile