RNA id: XR_005636560.1



Basic Information


Item Value
RNA id XR_005636560.1
length 93
RNA type snoRNA
GC content 0.47
exon number 1
gene id LOC120544757
representative True

Chromosome Information


Item Value
chromosome id NC_053127.1
NCBI id CM020924.1
chromosome length 37730433
location 34280925 ~ 34281017 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCACTGTGATGACGATTTTCCTGCCATTCGTAGTTTCCACCAGAGGTTGAAAGACCAAAGATGGCCCAACTCCTTCCTTGGATGTCTGAGTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU231500 lncRNA downstream 45388 34233915 ~ 34235537 (-) True G170793
TU231401 lncRNA downstream 57699 34220652 ~ 34223226 (-) True G170709
XR_005636404.1 lncRNA downstream 141032 34137920 ~ 34139893 (-) True LOC120543853
TU231388 lncRNA downstream 173122 34107514 ~ 34107803 (-) True G170696
TU231377 lncRNA downstream 701181 33568621 ~ 33579744 (-) True ntm
XR_005636379.1 lncRNA upstream 130785 34411802 ~ 34413193 (-) True LOC120543660
TU231599 lncRNA upstream 418879 34699896 ~ 34700115 (-) True G170830
TU231681 lncRNA upstream 642383 34923400 ~ 34931706 (-) False cblb
TU231683 lncRNA upstream 758791 35039808 ~ 35040363 (-) True G170897
TU231706 lncRNA upstream 800222 35081239 ~ 35090028 (-) True G170906
XM_039777120.1 mRNA downstream 3763 34235905 ~ 34277162 (-) False jhy
XM_039777119.1 mRNA downstream 3763 34235905 ~ 34277162 (-) False jhy
XM_039777118.1 mRNA downstream 3763 34235905 ~ 34277162 (-) True jhy
XM_039777166.1 mRNA downstream 546477 33573714 ~ 33734448 (-) False ntm
XM_039777126.1 mRNA upstream 3544 34284561 ~ 34300129 (-) True LOC120543837
XM_039777127.1 mRNA upstream 3544 34284561 ~ 34294428 (-) False LOC120543837
XM_039777123.1 mRNA upstream 3544 34284561 ~ 34294428 (-) False LOC120543837
XM_039777125.1 mRNA upstream 3544 34284561 ~ 34294428 (-) False LOC120543837
XM_039777122.1 mRNA upstream 3544 34284561 ~ 34294428 (-) False LOC120543837
XR_005636561.1 other downstream 1531 34279302 ~ 34279394 (-) True LOC120544758
TU231185 other downstream 1789620 32443286 ~ 32491305 (-) True LOC120543978
TU231114 other downstream 2078719 32201709 ~ 32202206 (-) True G170463
TU230664 other downstream 3322427 30957501 ~ 30958498 (-) True G170098
TU230602 other downstream 3429912 30849319 ~ 30851013 (-) False LOC120543892
TU231512 other upstream 27977 34308994 ~ 34309714 (-) True G170802
XR_005636548.1 other upstream 1456976 35737993 ~ 35738183 (-) True LOC120544743
XR_005636576.1 other upstream 1457452 35738469 ~ 35738586 (-) True LOC120544776
XR_005636552.1 other upstream 1457972 35738989 ~ 35739181 (-) True LOC120544747
XR_005636565.1 other upstream 1458443 35739460 ~ 35739576 (-) True LOC120544762

Expression Profile