RNA id: TU245384


Basic Information

Item Value
RNA id TU245384
length 3510
lncRNA type inter_gene
GC content 0.44
exon number 2
gene id G181024
representative False

Chromosome Information

Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36483794 ~ 36487729 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agagagagggagagagggagagaggggacagATCTCAAACATTCTTCCGTTGGCTAACTCTGGCCCGTTGTTAGCAGAGCCAAAGTATCTCTCGGGTTGGTaccgtgtctgtctgtgtgtctagaAGACTCCCTGATGTGTTCACTGACCGTCAGACAGCGCGGCGCCTCGTTTCTCTGAGCGTTTCAACGCTAACGAGGTCCAGTCTTCCTGAGCGGCTGCTGGTGGTTTACAGACTTTCATGATGAGTTTGAGTTTTGGACTCATCAGTCTGCCGGTCCCGTACGgtttcagcctgttctcatgaaccaatCGTACGTACAGCTGtaattcatattcatatttcaTGTTAGTTCTGGCTGTGTGCACCACGTTGCCTGCGGCTGTATGAGAACGCTGTGGGTCGTGTAGGGAGGATATCAGAGCGGATGTCTGGGTCCTAAAACACAGACGGGGAGCCGAGTgttacggtggccgacaggggcagacacactgcaacttaatgaaacgcacacaaatacacaccacacaagcaaattaaggaCACATcgtcattaatttgacaacacatgagcagcatttagcaaatgtgctaaaaatacagaaatgatgcattgtttctgtatttgcatcGCGTGTCTGTttgattgtgttgtgtgtatttggttgtgttgtattTGCAGCCTGTCTGTttgattgtgttgtgtgtatttggttgtgttgtatttgcagcgtgtctgtttgattgtgttgtgtgtatttggttgtgttgtatttgcagcgtgtctgtttgattgtgttgtgtgtatttggttgtgttgtatttgcagcgtgtctgtttgattgtgttgtgtgtatttgtgttgtatttgcagcgtgtctgtttgattgtgttgtgtgtatttggttgtgttgtatttgcagcgtgtctgtttgattgtgttgtgtgtatttggttgtgttgtattTGCAGCCTGTCTGTttgattgtgttgtgtgtatttggttgtgttgtatttgcagcgtgtctgtttgattgtgttgtgtgtatttggttgtgttgtatttgcagcgtgtctgtttgattgtgttgtgtgtatttggttgtgttgtattTGCAGCGTtgtgtttgctaaatgctgaTCATGTGTTGTCAGATTAATGAAGATGTGTCCTCAATTTGCTCGTGTTGTGTCTATTTGTGTGCGTTTCGTTAGGTTAGTGTGtctgcccctgtcggccaccgtagagcgttgcctaaacttaaccgtaatctcGGCTAAATCgcccggcagctcgcggtgctctgtacccgactCCCAGTCCCCTGTCCTCGGGTGAACCCATCTACTAACCAGCGCTGACAGCAGCGAGCTGGGACGGGGCTCTGTAGCTGCTCTAACAACCAGGGACGATGTCATAAAACACACTAACCCTAAAACTTTACCACTTCTTATCGGCTAAACTGAACCGCACTGTCTGCAGAAACgcccggcagctcgcggtgcccAACTACCGCTGGCACCACGGAGCTCTGTGGCCCACGGCCGCCTAGCTTCAAgccatgtattattattattattattacattttggtGTGCATAAATCTTCGTACATCATCATACGAACCTGTTCGTGGCAACGATTAATACCTTTTGTCGTTGGGTCCGGCTCAggttaaacatgaacaaacactaACCATGAACACTACACAACTTTCTTTTaatatccagtttgacagtcagtcataacaGAATAAGAGCATtgataaactactttaaagcaGATTTATTTCAGGGCTAAATTACGTATCAGATTGGTGCATAAACTGCAGTACTCTCAGGTAcaaataccagcattttaggcagtattggAGGTTTTTTAAGATActagtatcggtatcggaacatctctgcTAACTGTCTCTGATAGGACGGAGCTGTGTAGCGCCGTCACGCGTCCCGCCAGCTGTCGCGTGGTTTGGTACGATATATGGTTTGGTACGATATATGGTTTGGTACGATATATGGTTTGGTAGGATATATGGTTTGGTACGATATATGGTTTGGTAGGATATATGGTTTGGTACTGTACGATATATGGTTTGGTAGGATATATGGTTTGGTACTGTACGATATATGGTTTGGTACTGTACGATATATGGTTTGGTAGGATATATGGTTTGGTATGATATATGGTACGTCTCGGTGTGCGTATGTTTCTCGGCTGTATCGTACGGATCCGTTCATGAGAAGACgctgacatttttaacaaatcaaaagTAATCACAACTTCCTGCTGCCTTTCTTTTGCCTTTTTGTGATCTTGAGTCTATTTCTAATCACCTGAAACAGAGCAGCACTGCTGTACAATGACTtagaaacatatacacacacatatatatattgtataaaaaatacaatatctaTGTTTTTAACTCCTCAGCCATGTGCTTTTACGAAGTATATTCTAAttagttttctttttatatttctgtgtcAAATTGTTTTCCATCTTCcgtgtttttttcttattttcttgtgtgatttgtttaatAGTTTTGGTGACACTAATTAATAACTGAGATACTAGAAACACAAATCTAACTCTGTGGATCGAACTGATTCCTGACCAGACTTGGAAGCATTATGGGATGGAAGCTTTGAgtctaaaggccctgacacagcGACCAGGCGGCCGACCGTCAGCAGTacagccagtcggactgatcgggCTCCTCGAGGTCcagaaagttcctcagaacgCCCAagagacgccgacttgagcgtacgttctgcgcgtgtgCGACACGCAAGCGCctctaatctgtattgtcgcccaaaaaatgaaaaccgacagctgattggacgaacgtgtcacatgggtctggctgctccccgGCCATCATGGCGGCTTCGTTCGGAATACtatctcgtattttacaaagATAGTTTCTGAAAACGTGTGAAGAGAGAAACAGGCCGTGTagtgtctgaatctgtcttcatctcagatcagattttgagagactctagtcacctcatcccgctcgtcatttccaggttAGCTCTCctccaatcagattggtcattgagtctgactgcccgccctccgacccagcaagtcaggtcggcccAAATGAACGCCAACAGCCCCTCCGACTGCCGACTGCACGGACCACagcgaacagactcgagtcaccgacctcgccagactgtcagacgggCGACTATCAGCTCGGTGTGTCGGGGTCATTAGCCTGAATAATCATTTGCACTTGTAGAGAACTctaattattaaaatatgaattatgAACACACTATCTTTGAGAAGTTTCTGCTATCTTTAGAGTAAGAAAAACCTCTTTTTATGAAGTCAAACTGTAACAACGATAAAGGACTCGGGTTTGGAGAACTTGTTTTATCTTTGGTGTGATAAACATTCATGATACGGATacataatatttatattttcataaGATCACTTTGGGAGCTTTGATGCCGTTTTGTACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU245375 lncRNA downstream 1689 36384830 ~ 36482105 (-) True G181018
TU245376 lncRNA downstream 38825 36436983 ~ 36444969 (-) True G181019
TU245365 lncRNA downstream 160518 36315429 ~ 36323276 (-) True G181008
TU245363 lncRNA downstream 172250 36310339 ~ 36311544 (-) False G181007
TU245401 lncRNA upstream 7365 36495094 ~ 36495433 (-) True G181028
TU245402 lncRNA upstream 8244 36495973 ~ 36496480 (-) True G181029
TU245434 lncRNA upstream 108891 36596620 ~ 36597092 (-) True LOC120545341
XR_005636665.1 lncRNA upstream 108966 36596695 ~ 36597095 (-) False LOC120545341
TU245439 lncRNA upstream 165908 36653637 ~ 36674743 (-) True G181052
XM_039779484.1 mRNA downstream 8579 36459295 ~ 36475215 (-) True il7r
XM_039779490.1 mRNA downstream 130315 36344010 ~ 36353479 (-) False LOC120545285
XM_039779489.1 mRNA downstream 130315 36344010 ~ 36353479 (-) False LOC120545285
XM_039779488.1 mRNA downstream 130316 36344010 ~ 36353478 (-) False LOC120545285
XM_039779487.1 mRNA downstream 130316 36344010 ~ 36353478 (-) True LOC120545285
XM_039779091.1 mRNA upstream 1202 36488931 ~ 36576172 (-) True myo5b
XM_039779476.1 mRNA upstream 194179 36681908 ~ 36689875 (-) True LOC120545277
XM_039779477.1 mRNA upstream 422724 36910453 ~ 36921735 (-) True LOC120545278
XM_039779464.1 mRNA upstream 474251 36961980 ~ 36968041 (-) True LOC120545269
XM_039779474.1 mRNA upstream 506681 36994410 ~ 37010368 (-) True LOC120545275
TU245351 other downstream 163029 36314916 ~ 36320765 (-) False G181004
TU245355 other downstream 165331 36314916 ~ 36318463 (-) False G181004
TU245228 other downstream 447894 35689754 ~ 36035900 (-) True LOC120545322
TU245221 other downstream 520201 35816790 ~ 35963593 (-) True G180916
TU245259 other downstream 909169 35572178 ~ 35574625 (-) True G180944
TU245425 other upstream 85913 36573642 ~ 36576179 (-) False myo5b
TU245414 other upstream 194985 36682714 ~ 36698059 (-) False G181036
TU245418 other upstream 194985 36682714 ~ 36748618 (-) True G181036
TU245416 other upstream 210658 36698387 ~ 37009883 (-) False G181036
TU245415 other upstream 307842 36795571 ~ 37034186 (-) False G181036

Expression Profile