RNA id: TU245375



Basic Information


Item Value
RNA id TU245375
length 289
lncRNA type sense_over
GC content 0.52
exon number 2
gene id G181018
representative True

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36384830 ~ 36482105 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GACAGTTTGGGCCAATCAGAGTGTGTGAACGAGGCGAGGAGAGGATTCCCACAGTCCCGCTGTCGGTTGGTCCAGCTGTCTGTGGTTTACCTGTCGCTCAGGTggcacacacagagggagacacacacatacacacacgtacacatacacacacacacgctcacacacacacagacacatacacacacacacacacatacacacacacacacacatacacacacacacagacacatacacacacacacacacacacacacacacacacacacacacacacacacacacg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU245365 lncRNA downstream 61554 36315429 ~ 36323276 (-) True G181008
TU245353 lncRNA downstream 66367 36305016 ~ 36318463 (-) True G181004
TU245318 lncRNA downstream 73126 36123079 ~ 36311704 (-) True G180978
TU245359 lncRNA downstream 73286 36310102 ~ 36311544 (-) True G181007
TU245363 lncRNA downstream 73286 36310339 ~ 36311544 (-) False G181007
TU245384 lncRNA upstream 1689 36483794 ~ 36487729 (-) False G181024
TU245385 lncRNA upstream 1689 36483794 ~ 36487729 (-) False G181024
TU245386 lncRNA upstream 1689 36483794 ~ 36487729 (-) True G181024
TU245401 lncRNA upstream 12989 36495094 ~ 36495433 (-) True G181028
TU245402 lncRNA upstream 13868 36495973 ~ 36496480 (-) True G181029
XM_039779490.1 mRNA downstream 31351 36344010 ~ 36353479 (-) False LOC120545285
XM_039779489.1 mRNA downstream 31351 36344010 ~ 36353479 (-) False LOC120545285
XM_039779488.1 mRNA downstream 31352 36344010 ~ 36353478 (-) False LOC120545285
XM_039779487.1 mRNA downstream 31352 36344010 ~ 36353478 (-) True LOC120545285
XM_039779501.1 mRNA downstream 175120 36195084 ~ 36209710 (-) True LOC120545291
XM_039779091.1 mRNA upstream 6826 36488931 ~ 36576172 (-) True myo5b
XM_039779476.1 mRNA upstream 199803 36681908 ~ 36689875 (-) True LOC120545277
XM_039779477.1 mRNA upstream 428348 36910453 ~ 36921735 (-) True LOC120545278
XM_039779464.1 mRNA upstream 479875 36961980 ~ 36968041 (-) True LOC120545269
XM_039779474.1 mRNA upstream 512305 36994410 ~ 37010368 (-) True LOC120545275
TU245351 other downstream 64065 36314916 ~ 36320765 (-) False G181004
TU245355 other downstream 66367 36314916 ~ 36318463 (-) False G181004
TU245228 other downstream 348930 35689754 ~ 36035900 (-) True LOC120545322
TU245221 other downstream 421237 35816790 ~ 35963593 (-) True G180916
TU245259 other downstream 810205 35572178 ~ 35574625 (-) True G180944
TU245425 other upstream 91537 36573642 ~ 36576179 (-) False myo5b
TU245414 other upstream 200609 36682714 ~ 36698059 (-) False G181036
TU245418 other upstream 200609 36682714 ~ 36748618 (-) True G181036
TU245416 other upstream 216282 36698387 ~ 37009883 (-) False G181036
TU245415 other upstream 313466 36795571 ~ 37034186 (-) False G181036

Expression Profile