RNA id: TU245365



Basic Information


Item Value
RNA id TU245365
length 408
lncRNA type inter_gene
GC content 0.47
exon number 2
gene id G181008
representative True

Chromosome Information


Item Value
chromosome id NC_053128.1
NCBI id CM020925.1
chromosome length 37416781
location 36315429 ~ 36323276 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtgtgtctgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtctgtctgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctctctgtctgtgtgtctgtctgtgtgtgtgtatctgtctgtctgtctgtctgtctgtctgtctgtgtgtgtgtgtatctgtctgtgtgtgtgtgtgtgtgtctgtctgtctgtctgtctgtctgtctgtctgtctgaacacgATACATGTGTACCGTCTCCTTTAGTCTACGTCAGAGTTAAAGGAGAGCTTTCATTGGccgtaataataaataatgttcTTCCATTCGCTGGACCTTCTTAGGTCTAGCATCATAGCATCTTAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU245318 lncRNA downstream 3725 36123079 ~ 36311704 (-) True G180978
TU245359 lncRNA downstream 3885 36310102 ~ 36311544 (-) True G181007
TU245363 lncRNA downstream 3885 36310339 ~ 36311544 (-) False G181007
TU245358 lncRNA downstream 3885 36310542 ~ 36311544 (-) False G181007
TU245362 lncRNA downstream 3885 36310542 ~ 36311544 (-) False G181007
TU245375 lncRNA upstream 61554 36384830 ~ 36482105 (-) True G181018
TU245376 lncRNA upstream 113707 36436983 ~ 36444969 (-) True G181019
TU245384 lncRNA upstream 160518 36483794 ~ 36487729 (-) False G181024
TU245385 lncRNA upstream 160518 36483794 ~ 36487729 (-) False G181024
TU245386 lncRNA upstream 160518 36483794 ~ 36487729 (-) True G181024
XM_039779501.1 mRNA downstream 105719 36195084 ~ 36209710 (-) True LOC120545291
XM_039779499.1 mRNA downstream 105719 36195093 ~ 36209710 (-) False LOC120545291
XM_039779500.1 mRNA downstream 105750 36195092 ~ 36209679 (-) False LOC120545291
XM_039779502.1 mRNA downstream 106166 36195089 ~ 36209263 (-) False LOC120545291
XM_039779495.1 mRNA downstream 169110 36135058 ~ 36146319 (-) True LOC120545288
XM_039779490.1 mRNA upstream 20734 36344010 ~ 36353479 (-) False LOC120545285
XM_039779489.1 mRNA upstream 20734 36344010 ~ 36353479 (-) False LOC120545285
XM_039779488.1 mRNA upstream 20734 36344010 ~ 36353478 (-) False LOC120545285
XM_039779487.1 mRNA upstream 20734 36344010 ~ 36353478 (-) True LOC120545285
XM_039779484.1 mRNA upstream 136019 36459295 ~ 36475215 (-) True il7r
TU245228 other downstream 279529 35689754 ~ 36035900 (-) True LOC120545322
TU245221 other downstream 351836 35816790 ~ 35963593 (-) True G180916
TU245259 other downstream 740804 35572178 ~ 35574625 (-) True G180944
TU245007 other downstream 880568 35037024 ~ 35434861 (-) False LOC120545308
XR_005636645.1 other downstream 1275946 35037050 ~ 35039483 (-) False LOC120545308
TU245425 other upstream 250366 36573642 ~ 36576179 (-) False myo5b
TU245414 other upstream 359438 36682714 ~ 36698059 (-) False G181036
TU245418 other upstream 359438 36682714 ~ 36748618 (-) True G181036
TU245416 other upstream 375111 36698387 ~ 37009883 (-) False G181036
TU245415 other upstream 472295 36795571 ~ 37034186 (-) False G181036

Expression Profile