RNA id: TU255073


Basic Information

Item Value
RNA id TU255073
length 282
lncRNA type inter_gene
GC content 0.37
exon number 2
gene id G188333
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 30027137 ~ 30027805 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tcacaaatattcatcaacttgaaatcggacaccgttgttagctttataaaaacatttagttagatgttgtataagtggcgtgatgaaattcaaactgtaaatatactcgaattacgaccaaaatgaagctaactagcctcaatgtgtacacataggattgaagggacagtcgcagctaacgaaacccttacagctcacaaatattcattaacttgaaatcggacaccgttgttagctttataagacctttaggtatgttgtatagctaagtggcgtgacatg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU255051 lncRNA upstream 41635 29928842 ~ 29985502 (+) True G188321
XR_005636974.1 lncRNA upstream 48070 29966970 ~ 29979067 (+) True LOC120546874
XR_005636975.1 lncRNA upstream 91651 29934594 ~ 29935486 (+) True LOC120546875
TU255055 lncRNA upstream 94277 29932550 ~ 29932860 (+) True G188323
XR_005636969.1 lncRNA upstream 138253 29886864 ~ 29888884 (+) True LOC120546868
XR_005636973.1 lncRNA downstream 3095 30030900 ~ 30035201 (+) True LOC120546873
XR_005636972.1 lncRNA downstream 4876 30032681 ~ 30035201 (+) False LOC120546873
XR_005636970.1 lncRNA downstream 26553 30054358 ~ 30056424 (+) True LOC120546872
XR_005636971.1 lncRNA downstream 26553 30054358 ~ 30056424 (+) False LOC120546872
TU255014 lncRNA downstream 43204 30071009 ~ 30072741 (+) True G188294
XM_039781362.1 mRNA upstream 4495 30012155 ~ 30022642 (+) True LOC120546436
XM_039782112.1 mRNA upstream 83304 29895425 ~ 29943833 (+) False LOC120546870
XM_039782109.1 mRNA upstream 120443 29895425 ~ 29906694 (+) False LOC120546870
XM_039782111.1 mRNA upstream 120443 29895425 ~ 29906694 (+) False LOC120546870
XM_039782110.1 mRNA upstream 120443 29897460 ~ 29906694 (+) True LOC120546870
XM_039782106.1 mRNA downstream 1145 30028950 ~ 30083063 (+) False LOC120546869
XM_039782101.1 mRNA downstream 45643 30073448 ~ 30083063 (+) False LOC120546869
XM_039782107.1 mRNA downstream 45643 30073448 ~ 30083063 (+) False LOC120546869
XM_039782104.1 mRNA downstream 45643 30073448 ~ 30083063 (+) False LOC120546869
XM_039782103.1 mRNA downstream 45643 30073448 ~ 30083063 (+) False LOC120546869
TU255018 other upstream 381314 29645254 ~ 29645823 (+) True G188296
TU254981 other upstream 563263 29461849 ~ 29463874 (+) True G188268
TU254910 other upstream 606410 29419376 ~ 29420727 (+) True G188207
TU254892 other upstream 714773 29292741 ~ 29312364 (+) False si:ch211-245h14.1
unassigned_transcript_1091 other downstream 345861 30373666 ~ 30373738 (+) True trnat-ugu_4
TU255132 other downstream 596675 30624480 ~ 30659281 (+) False G188352
XR_005636985.1 other downstream 766414 30794219 ~ 30812143 (+) False LOC120546905
TU255105 other downstream 826170 30853975 ~ 30855364 (+) False G188352
XR_005637052.1 other downstream 1470150 31497955 ~ 31498174 (+) True LOC120547349

Expression Profile