RNA id: TU256522


Basic Information

Item Value
RNA id TU256522
length 554
RNA type TUCP
GC content 0.46
exon number 3
gene id G189307
representative True

Chromosome Information

Item Value
chromosome id NC_053129.1
NCBI id CM020926.1
chromosome length 36987114
location 33932064 ~ 33939387 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

agtctgtgtgtgtgtctctgtgtgtgtctttctgtgtgtgtgtgtgtgtgtgtgagtctgtgtgtgtgtgtgtgtgtgtgtgtgtgttaagtgtctctgtgtgtgtgtgtgtgtgtgtgtctgtatgtgtgtgtgtctgtgtgtgtgtgtgtctgtatgtgtgtgtgtctgtgtgtgcgtgcatctgtgtgtgtacctaggtgtgtgtgtctgtgtgtgtctttctgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctggctctGTTCCCTAAAACAAACCGTACTATTGTGTAGTAACAACGTTGCTAGAAGAGTAACTGACCTGTCGGAGTGTTTTTACTGCCAACAAGTCACGTTCAACATTAATTAActtgagagtttttttttaaagtgaaataGCTTCCAGAGAAGAGCccaaaaacagc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU256517 lncRNA upstream 34491 33887512 ~ 33897573 (+) True G189302
TU256570 lncRNA upstream 39614 33890679 ~ 33892450 (+) True G189345
TU256571 lncRNA upstream 40277 33890507 ~ 33891787 (+) False G189345
TU256563 lncRNA upstream 47066 33839721 ~ 33884998 (+) True G189339
TU256568 lncRNA upstream 55617 33863205 ~ 33876447 (+) True G189344
TU256710 lncRNA downstream 107224 34046611 ~ 34047007 (+) True G189439
XR_005636834.1 lncRNA downstream 130214 34069601 ~ 34071742 (+) True LOC120546208
XR_005637028.1 lncRNA downstream 140872 34080259 ~ 34096714 (+) True LOC120547081
TU256727 lncRNA downstream 162124 34101511 ~ 34102289 (+) True G189450
XR_005636863.1 lncRNA downstream 163356 34102743 ~ 34104308 (+) True LOC120546319
XM_039781373.1 mRNA upstream 75652 33846444 ~ 33856412 (+) True LOC120546446
XM_039781371.1 mRNA upstream 160662 33765353 ~ 33771402 (+) True LOC120546444
XM_039780949.1 mRNA upstream 265811 33629800 ~ 33666253 (+) True LOC120546181
XM_039780971.1 mRNA upstream 515978 33399801 ~ 33416086 (+) True LOC120546192
XM_039782542.1 mRNA upstream 545075 33328092 ~ 33386989 (+) False pex7
XM_039781947.1 mRNA downstream 69009 34008396 ~ 34013448 (+) False LOC120546767
XM_039781946.1 mRNA downstream 71553 34010940 ~ 34013448 (+) True LOC120546767
XM_039781374.1 mRNA downstream 79244 34018631 ~ 34035953 (+) True LOC120546447
XM_039782426.1 mRNA downstream 97669 34037056 ~ 34052641 (+) True LOC120547053
XM_039782425.1 mRNA downstream 99175 34038562 ~ 34052641 (+) False LOC120547053
TU256516 other upstream 71661 33859146 ~ 33860403 (+) False LOC120546766
TU256542 other upstream 160691 33765501 ~ 33771373 (+) False LOC120546444
XR_005637066.1 other upstream 168438 33763465 ~ 33763626 (+) True LOC120547364
TU256525 other upstream 246508 33641620 ~ 33685556 (+) True G189309
TU256470 other upstream 473296 33453996 ~ 33458768 (+) True G189269
TU256520 other downstream 26196 33965583 ~ 33986476 (+) True G189305
TU256875 other downstream 523521 34462908 ~ 34464897 (+) True G189544
TU256872 other downstream 543477 34482864 ~ 34503755 (+) True G189541
TU256921 other downstream 547037 34486424 ~ 34487177 (+) True G189570
XR_005637062.1 other downstream 579901 34519288 ~ 34519426 (+) True LOC120547360

Expression Profile