Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039785914.1 |
| length | 1744 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 1 |
| gene id | LOC120549204 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053131.1 |
| NCBI id | CM020928.1 |
| chromosome length | 36057207 |
| location | 656330 ~ 658073 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0042074 | cell migration involved in gastrulation | biological_process |
| GO:0090024 | negative regulation of neutrophil chemotaxis | biological_process |
| GO:0001764 | neuron migration | biological_process |
| GO:0031290 | retinal ganglion cell axon guidance | biological_process |
| GO:0006955 | immune response | biological_process |
| GO:2000472 | negative regulation of hematopoietic stem cell migration | biological_process |
| GO:0050930 | induction of positive chemotaxis | biological_process |
| GO:0009887 | animal organ morphogenesis | biological_process |
| GO:0048842 | positive regulation of axon extension involved in axon guidance | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0031101 | fin regeneration | biological_process |
| GO:0008285 | negative regulation of cell population proliferation | biological_process |
| GO:0048920 | posterior lateral line neuromast primordium migration | biological_process |
| GO:0008354 | germ cell migration | biological_process |
| GO:0030900 | forebrain development | biological_process |
| GO:0030335 | positive regulation of cell migration | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0008009 | chemokine activity | molecular_function |
| GO:0042056 | chemoattractant activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU270162 | lncRNA | upstream | 9412 | 646671 ~ 646918 (+) | True | G199251 |
| TU270147 | lncRNA | upstream | 62946 | 593182 ~ 593384 (+) | True | G199236 |
| XR_005637346.1 | lncRNA | upstream | 178766 | 475130 ~ 477564 (+) | False | LOC120549205 |
| TU270118 | lncRNA | upstream | 178771 | 474987 ~ 477559 (+) | True | LOC120549205 |
| TU270121 | lncRNA | upstream | 180002 | 474987 ~ 476328 (+) | False | LOC120549205 |
| XR_005637350.1 | lncRNA | downstream | 46147 | 704220 ~ 718323 (+) | True | LOC120549209 |
| TU270187 | lncRNA | downstream | 148778 | 806851 ~ 808359 (+) | True | G199265 |
| TU270201 | lncRNA | downstream | 184068 | 842141 ~ 842444 (+) | True | G199276 |
| TU270231 | lncRNA | downstream | 239335 | 897408 ~ 897838 (+) | True | G199294 |
| TU270234 | lncRNA | downstream | 291699 | 949772 ~ 950124 (+) | True | G199297 |
| XM_039786597.1 | mRNA | upstream | 228795 | 425361 ~ 427535 (+) | True | LOC120549579 |
| XM_039785912.1 | mRNA | upstream | 533777 | 121003 ~ 122553 (+) | True | LOC120549203 |
| XM_039786551.1 | mRNA | upstream | 594160 | 57972 ~ 62170 (+) | True | LOC120549549 |
| XM_039785909.1 | mRNA | upstream | 600736 | 53916 ~ 55594 (+) | True | LOC120549201 |
| XM_039785911.1 | mRNA | upstream | 605900 | 44184 ~ 50430 (+) | True | LOC120549202 |
| XM_039785381.1 | mRNA | downstream | 338548 | 996621 ~ 1001424 (+) | True | LOC120548863 |
| XM_039785383.1 | mRNA | downstream | 1132162 | 1790235 ~ 1792718 (+) | True | LOC120548868 |
| XM_039785385.1 | mRNA | downstream | 1135807 | 1793880 ~ 1800729 (+) | True | LOC120548869 |
| XM_039785386.1 | mRNA | downstream | 1160130 | 1818203 ~ 1819621 (+) | True | LOC120548870 |
| XM_039785387.1 | mRNA | downstream | 1484099 | 2142172 ~ 2152961 (+) | True | LOC120548871 |
| unassigned_transcript_1125 | other | upstream | 185608 | 470650 ~ 470722 (+) | True | trnav-aac_28 |
| XR_005637528.1 | other | upstream | 390370 | 265798 ~ 265960 (+) | True | LOC120550040 |
| XR_005637527.1 | other | upstream | 391004 | 265165 ~ 265326 (+) | True | LOC120550039 |
| XR_005637525.1 | other | upstream | 392272 | 263897 ~ 264058 (+) | True | LOC120550036 |
| XR_005637524.1 | other | upstream | 392917 | 263253 ~ 263413 (+) | True | LOC120550034 |
| TU270249 | other | downstream | 305036 | 963109 ~ 992012 (+) | True | G199306 |
| TU270323 | other | downstream | 441511 | 1099584 ~ 1101404 (+) | True | LOC120549526 |
| XR_005637626.1 | other | downstream | 751951 | 1410024 ~ 1410142 (+) | True | LOC120550151 |
| XR_005637719.1 | other | downstream | 752175 | 1410248 ~ 1410366 (+) | True | LOC120550347 |
| XR_005637708.1 | other | downstream | 752620 | 1410693 ~ 1410810 (+) | True | LOC120550237 |
