RNA id: TCONS_00073315


Basic Information

Item Value
RNA id TCONS_00073315
length 1111
RNA type mRNA
GC content 0.46
exon number 8
gene id XLOC_037251
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 32306862 ~ 32312862 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGGGGGCGCGCTGTCAATCAAACTCTAAATCTGTCGAGATGGTCATGGCGGAGGGCACAGCTGTTCTGAGGAGGAATAGACCAGGCACCAAGGCGAAGGACTTCTAtaactggtctgatgagtcttttgaagaaatggacagcacctTGGCTGTGCAACAATACATTCAGCAGAACATTCGCTCAGATTGTTCCAACATAGAGAAGATTATGGAGCCTCCAGAGGGACAGGATGAGGGGGTGTGGAAATATGAACATCTCAGACAGTTCTGTTTGGAGCTCAATGGCTTGGCAGTTAAACTGCAGAATGAGTGTCATCCAGACACATGTACCCAGATGACGGCCACTGAGCAGTGGATCTTTCTGTGTGCTGCCCACAAGACTCCCAAAGAGTGCCCTGCCATTGATTACACAAGGCACACCCTGGATGGAGCTGCATGTCTTCTCAACAGCAACAAGTATTTTCCCAGCCGCGTCAGCATTAAGGAATCATCTGTGGCCAAACTGGGCTCTGTTTGCCGTCGCATCTATAGGATCTTCTCCCATGCGTACTTTCACCATCGCCAGATTTTTGACAAGTATGAGAATGAGACCTTTTTGTGTCATCGCTTCACCCGTTTCGTGATGAAGTACAACCTCATGTCTAAGGACAACCTCATTGTGCCCATCCTGGAGGAGGAAGTCCAGAGTGCCACCGCTGGCGAAAGCGATGCCTGAGCTGCGTCTTGTGCATTTGAAGCCTCAAGCATCCAGACAGCAGAGGCCAATAACGTCAGTCGTTACTTTTCCACTcacaaatgttttgtttgattCGAATTCCATCGTTCAGCTGTAACAATCAATTCCAACATAACATCAACAGCTACTTGTACATATCTCAGCTCATCTCCATTGTAAATCCTGCTTAACCAATAAGAACTTCCTTTCTTTTTCCCCCCTCTCTCGACTATAAGCGAGTCTGGTGATATTCACCCTGTCTTTTCCCTCGTTTTTAAGTTATTACATGGGTGGAGGGCTCTCATCCGGCCCACTTtgtcctttttttaaaataaactaaaatgtatgGTATTTTCATTATGTCAATTGTTAATAAAAGACTTGTACCTAGCCAA

Function

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016740 transferase activity molecular_function
GO:0016301 kinase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040801-174 Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Is expressed in head. Orthologous to several human genes including MOB4 (MOB family member 4, phocein).

Ensembl:

ensembl_id ENSDART00000078513

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00074917 lncRNA upstream 68753 32223695 ~ 32238109 (+) True XLOC_037249
TCONS_00073308 lncRNA upstream 114343 32189139 ~ 32192519 (+) True XLOC_037248
TCONS_00073295 lncRNA upstream 235729 32069957 ~ 32071133 (+) False XLOC_037245
TCONS_00075154 lncRNA upstream 392400 31913496 ~ 31914462 (+) True XLOC_037243
TCONS_00075153 lncRNA upstream 878128 31416834 ~ 31428734 (+) True XLOC_037238
TCONS_00075155 lncRNA downstream 32021 32344883 ~ 32349025 (+) True XLOC_037252
TCONS_00074918 lncRNA downstream 223884 32536746 ~ 32537384 (+) True XLOC_037254
TCONS_00073321 lncRNA downstream 336214 32649076 ~ 32651437 (+) False XLOC_037255
TCONS_00073325 lncRNA downstream 336645 32649507 ~ 32650104 (+) True XLOC_037255
TCONS_00075156 lncRNA downstream 579035 32891897 ~ 32895100 (+) True XLOC_037257
TCONS_00073311 mRNA upstream 1855 32301125 ~ 32305007 (+) False XLOC_037250
TCONS_00073310 mRNA upstream 1857 32301125 ~ 32305005 (+) False XLOC_037250
TCONS_00073312 mRNA upstream 1857 32301456 ~ 32305005 (+) False XLOC_037250
TCONS_00073309 mRNA upstream 2286 32301017 ~ 32304576 (+) False XLOC_037250
TCONS_00073313 mRNA upstream 2286 32301549 ~ 32304576 (+) False XLOC_037250
TCONS_00073316 mRNA downstream 45652 32358514 ~ 32457143 (+) False XLOC_037253
TCONS_00073317 mRNA downstream 115817 32428679 ~ 32457204 (+) False XLOC_037253
TCONS_00073318 mRNA downstream 115820 32428682 ~ 32457204 (+) False XLOC_037253
TCONS_00073319 mRNA downstream 118804 32431666 ~ 32457334 (+) True XLOC_037253
TCONS_00073320 mRNA downstream 322684 32635546 ~ 32670526 (+) False XLOC_037255
TCONS_00073307 other upstream 119610 32184055 ~ 32187252 (+) True XLOC_037247
TCONS_00073304 other upstream 203055 32100203 ~ 32103807 (+) True XLOC_037246
TCONS_00073294 other upstream 313429 31993311 ~ 31993433 (+) True XLOC_037244
TCONS_00073291 other upstream 734183 31566399 ~ 31572679 (+) True XLOC_037241
TCONS_00073288 other upstream 811097 31495648 ~ 31495765 (+) True XLOC_037239
TCONS_00073322 other downstream 336214 32649076 ~ 32652072 (+) False XLOC_037255
TCONS_00073333 other downstream 761818 33074680 ~ 33082181 (+) True XLOC_037261
TCONS_00073341 other downstream 867820 33180682 ~ 33181352 (+) True XLOC_037264
TCONS_00073351 other downstream 931336 33244198 ~ 33245755 (+) True XLOC_037270
TCONS_00073362 other downstream 1497584 33810446 ~ 33836470 (+) True XLOC_037278

Expression Profile

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Homologous

species RNA id representative length rna type GC content exon number chromosome id location
grasscarp (Ctenopharyngodon idella) CI01000009_01993176_01999494.mRNA True 1057 mRNA 0.45 8 CI01000009 1993176 ~ 1999873 (+)