RNA id: TCONS_00073751



Basic Information


Item Value
RNA id TCONS_00073751
length 582
lncRNA type lincRNA
GC content 0.50
exon number 4
gene id XLOC_037532
representative True

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 407678 ~ 414488 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence


GGAAATCTGGCAGGTTTCTTCGCACTGTTTGCTCCACTGGCGTGATATTTCTGGCATTGCAATGTGGGATGCAGATCACCTTCGCATATGTTCCCAAGGATGagactgGACCATGGGATGATGTTTTCTTTCACCTTGGCATTGTCAGGTTCAGTGAAGTGGACACACTAAACATAATCCGCCTGTTAACTCCAGATGTGGTGGTGTCCGTGTCAACACTGTTCATCATCCGCTGGTGTAAAGCCAGAAAGCCCCATCAGAGTGAAGACGGCAGAGCGATGTACAGCACTGAGGGCTCGGATGAAGAGATGTCGGACTCAGAATGTGAAGCGGAGAGCAGAGGATCTGAGGACTCGTCTTTCGACACCTCCGCCGAGACCCGTATTTCTCCAGACGCATCTCCAGACGTCCTGCAGAAACTGATCCTGTTCGTGAGCGGTCTGAGACTCCTGGTGTCGTCTCTAATGAACAGTGCTGGAAGAGTCCTGGTCACCTTTCTGCTGGGACTGGCGGGTAATGCAAGCACACAGCTGAAGACTACATCATCCACCATCctgtgaaattattatttatatgctgttt

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000194206

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TCONS_00074956 lncRNA downstream 145214 257549 ~ 263763 (-) True XLOC_037522
TCONS_00074955 lncRNA downstream 149485 256513 ~ 259492 (-) False XLOC_037522
TCONS_00074954 lncRNA downstream 160732 246293 ~ 248245 (-) True XLOC_037521
TCONS_00074952 lncRNA downstream 160789 245302 ~ 248188 (-) False XLOC_037521
TCONS_00075251 lncRNA upstream 19887 434375 ~ 437799 (-) False XLOC_037533
TCONS_00075252 lncRNA upstream 19887 434375 ~ 437803 (-) True XLOC_037533
TCONS_00073757 lncRNA upstream 46731 461219 ~ 463221 (-) False XLOC_037537
TCONS_00074957 lncRNA upstream 326181 740669 ~ 746147 (-) True XLOC_037540
TCONS_00075253 lncRNA upstream 343105 757593 ~ 758416 (-) True XLOC_037541
TCONS_00073749 mRNA downstream 5210 396346 ~ 403767 (-) True XLOC_037531
TCONS_00073748 mRNA downstream 14889 391499 ~ 394088 (-) True XLOC_037530
TCONS_00073747 mRNA downstream 18103 387317 ~ 390874 (-) True XLOC_037529
TCONS_00073746 mRNA downstream 34284 373635 ~ 374693 (-) True XLOC_037528
TCONS_00073745 mRNA downstream 38752 365596 ~ 370225 (-) True XLOC_037527
TCONS_00073752 mRNA upstream 25708 440196 ~ 443451 (-) True XLOC_037534
TCONS_00073753 mRNA upstream 30983 445471 ~ 456541 (-) True XLOC_037535
TCONS_00073754 mRNA upstream 44263 458751 ~ 459910 (-) False XLOC_037536
TCONS_00073755 mRNA upstream 44270 458758 ~ 460730 (-) True XLOC_037536
TCONS_00073756 mRNA upstream 46655 461143 ~ 464737 (-) False XLOC_037537
TCONS_00073774 other upstream 588953 1003441 ~ 1003555 (-) True XLOC_037549
TCONS_00073777 other upstream 964888 1379376 ~ 1379490 (-) True XLOC_037555
TCONS_00073788 other upstream 1230195 1644683 ~ 1644761 (-) True XLOC_037561
TCONS_00073793 other upstream 1334431 1748919 ~ 1749036 (-) True XLOC_037563
TCONS_00073794 other upstream 1516952 1931440 ~ 1934086 (-) True XLOC_037564

Expression Profile


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