RNA id: TU69609



Basic Information


Item Value
RNA id TU69609
length 224
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G52137
representative True

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22327655 ~ 22327878 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ccctgcaactgcctccggagtcctctgggataacatatcccggaaagactccttcttcagtcggacggcttccctgaccaccggtgtccaccatggtgttcgtgggttaccgccccttgaggcacctaagaccctaagaccacagctcctcgccgcagcttcagcaatggaaactttgaacattgtccactctggttcaatgcccccagcctccacagggatgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU69607 lncRNA downstream 23861 22303165 ~ 22303794 (-) True G52135
TU69593 lncRNA downstream 61602 22243811 ~ 22266053 (-) True G52124
TU69597 lncRNA downstream 78935 22248137 ~ 22248720 (-) True G52128
TU69596 lncRNA downstream 79572 22247110 ~ 22248083 (-) True G52127
TU69595 lncRNA downstream 84327 22242523 ~ 22243328 (-) True G52126
TU69697 lncRNA upstream 139193 22467071 ~ 22467531 (-) True G52197
TU69746 lncRNA upstream 207674 22535552 ~ 22538147 (-) True G52231
TU69748 lncRNA upstream 207674 22535552 ~ 22538147 (-) False G52231
TU69751 lncRNA upstream 211561 22539439 ~ 22541999 (-) True G52232
TU69752 lncRNA upstream 215447 22543325 ~ 22543913 (-) True G52233
XM_039801732.1 mRNA downstream 32214 22279402 ~ 22295441 (-) True fignl2
XM_039801733.1 mRNA downstream 33407 22279402 ~ 22294248 (-) False fignl2
XM_039800874.1 mRNA downstream 53175 22251254 ~ 22274480 (-) True stat6
XM_039800875.1 mRNA downstream 53176 22251254 ~ 22274479 (-) False stat6
XM_039801259.1 mRNA downstream 90447 22231147 ~ 22237208 (-) False dtx3
XM_039799532.1 mRNA upstream 13547 22341425 ~ 22388204 (-) True scn8aa
XM_039800166.1 mRNA upstream 69992 22397870 ~ 22441829 (-) True dip2ba
XM_039800169.1 mRNA upstream 72343 22400221 ~ 22441829 (-) False dip2ba
XM_039800167.1 mRNA upstream 72343 22400221 ~ 22441829 (-) False dip2ba
XM_039800168.1 mRNA upstream 72343 22400221 ~ 22441655 (-) False dip2ba
XR_005639375.1 other downstream 98234 22223149 ~ 22229421 (-) False LOC120559880
XR_005639356.1 other downstream 312612 21973701 ~ 22015043 (-) False si:dkey-151g10.3
XR_005639338.1 other downstream 1128612 21167971 ~ 21199043 (-) True fmnl3
XR_005639107.1 other downstream 1375137 20920699 ~ 20952518 (-) False LOC120558386
TU69738 other upstream 201728 22529606 ~ 22530708 (-) True G52226
XR_005639228.1 other upstream 886220 23214098 ~ 23218900 (-) False si:ch211-150o23.3
XR_005639229.1 other upstream 886220 23214098 ~ 23218900 (-) False si:ch211-150o23.3
TU70089 other upstream 980622 23308500 ~ 23319684 (-) True G52501
TU70430 other upstream 2007271 24335149 ~ 24339456 (-) False masp2

Expression Profile