Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039801095.1 |
| length | 1241 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 1 |
| gene id | LOC120559399 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053116.1 |
| NCBI id | CM020913.1 |
| chromosome length | 44101041 |
| location | 2616360 ~ 2617600 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0003401 | axis elongation | biological_process |
| GO:0060028 | convergent extension involved in axis elongation | biological_process |
| GO:0060560 | developmental growth involved in morphogenesis | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU62578 | lncRNA | downstream | 49910 | 2496979 ~ 2566450 (-) | True | G46746 |
| XR_005639277.1 | lncRNA | downstream | 92862 | 2522845 ~ 2523498 (-) | False | LOC120559435 |
| TU62591 | lncRNA | downstream | 93143 | 2522537 ~ 2523217 (-) | True | LOC120559435 |
| TU62563 | lncRNA | downstream | 150558 | 2464071 ~ 2465802 (-) | True | G46732 |
| TU62535 | lncRNA | downstream | 263799 | 2347782 ~ 2352561 (-) | True | G46705 |
| XR_005639275.1 | lncRNA | upstream | 43131 | 2660731 ~ 2662712 (-) | True | LOC120559433 |
| XR_005639274.1 | lncRNA | upstream | 43131 | 2660731 ~ 2661466 (-) | False | LOC120559433 |
| TU62629 | lncRNA | upstream | 43139 | 2660739 ~ 2661472 (-) | False | LOC120559433 |
| TU62637 | lncRNA | upstream | 68525 | 2686125 ~ 2686554 (-) | True | G46798 |
| XR_005639269.1 | lncRNA | upstream | 438973 | 3056573 ~ 3059454 (-) | True | LOC120559428 |
| XM_039799554.1 | mRNA | downstream | 45386 | 2568810 ~ 2570974 (-) | True | LOC120558520 |
| XM_039799535.1 | mRNA | downstream | 71119 | 2532812 ~ 2545241 (-) | True | LOC120558513 |
| XM_039801092.1 | mRNA | downstream | 125236 | 2488542 ~ 2491124 (-) | True | LOC120559397 |
| XM_039801091.1 | mRNA | downstream | 153679 | 2449190 ~ 2462681 (-) | True | LOC120559396 |
| XM_039801087.1 | mRNA | downstream | 193048 | 2420724 ~ 2423312 (-) | True | LOC120559393 |
| XM_039799555.1 | mRNA | upstream | 10122 | 2627722 ~ 2629202 (-) | True | LOC120558522 |
| XM_039801107.1 | mRNA | upstream | 101503 | 2719103 ~ 2726894 (-) | True | LOC120559408 |
| XM_039801099.1 | mRNA | upstream | 139909 | 2757509 ~ 2761155 (-) | True | LOC120559403 |
| XM_039799570.1 | mRNA | upstream | 144676 | 2762276 ~ 2764876 (-) | True | LOC120558533 |
| XM_039799571.1 | mRNA | upstream | 147418 | 2765018 ~ 2803278 (-) | True | LOC120558535 |
| TU62526 | other | downstream | 268856 | 2346505 ~ 2347504 (-) | True | G46698 |
| XR_005639246.1 | other | downstream | 280659 | 2329654 ~ 2335701 (-) | False | LOC120559407 |
| XR_005639247.1 | other | downstream | 280659 | 2334724 ~ 2335701 (-) | False | LOC120559407 |
| XR_005639248.1 | other | downstream | 285117 | 2329654 ~ 2331243 (-) | True | LOC120559407 |
| TU61886 | other | downstream | 1371235 | 1236385 ~ 1245125 (-) | False | rps21 |
| unassigned_transcript_222 | other | upstream | 326656 | 2944256 ~ 2944327 (-) | True | trnaq-cug_2 |
| unassigned_transcript_223 | other | upstream | 327253 | 2944853 ~ 2944924 (-) | True | trnaq-cug_3 |
| TU62665 | other | upstream | 665441 | 3283041 ~ 3285923 (-) | True | G46817 |
| TU62955 | other | upstream | 1337426 | 3955026 ~ 3955529 (-) | True | G47058 |
| TU62956 | other | upstream | 1338004 | 3955604 ~ 3956382 (-) | True | G47059 |
