Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039802909.1 |
| length | 1311 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 10 |
| gene id | LOC120560421 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 7632692 ~ 7639409 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0034220 | ion transmembrane transport | biological_process |
| GO:0035590 | purinergic nucleotide receptor signaling pathway | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0005216 | ion channel activity | molecular_function |
| GO:0001614 | purinergic nucleotide receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU80343 | lncRNA | upstream | 1451 | 7630506 ~ 7631241 (+) | True | G59826 |
| TU80351 | lncRNA | upstream | 44062 | 7587795 ~ 7588630 (+) | True | G59833 |
| TU80345 | lncRNA | upstream | 56565 | 7574730 ~ 7576127 (+) | False | LOC120560567 |
| TU80344 | lncRNA | upstream | 56608 | 7574730 ~ 7576084 (+) | False | LOC120560567 |
| TU80313 | lncRNA | upstream | 131911 | 7498489 ~ 7500781 (+) | False | G59804 |
| TU80365 | lncRNA | downstream | 7575 | 7646705 ~ 7647149 (+) | True | G59839 |
| TU80492 | lncRNA | downstream | 235684 | 7874814 ~ 7878371 (+) | False | atp2a2a |
| TU80491 | lncRNA | downstream | 238038 | 7877168 ~ 7878371 (+) | False | atp2a2a |
| TU80483 | lncRNA | downstream | 281647 | 7920777 ~ 7924556 (+) | True | G59931 |
| TU80665 | lncRNA | downstream | 587762 | 8226892 ~ 8227173 (+) | True | G60082 |
| XM_039802906.1 | mRNA | upstream | 2512 | 7625736 ~ 7630180 (+) | False | zbtb26 |
| XM_039802904.1 | mRNA | upstream | 2512 | 7627170 ~ 7630180 (+) | True | zbtb26 |
| XM_039802900.1 | mRNA | upstream | 8998 | 7600096 ~ 7623694 (+) | False | susd1 |
| XM_039803853.1 | mRNA | downstream | 10643 | 7649773 ~ 7657652 (+) | True | LOC120560946 |
| XM_039803854.1 | mRNA | downstream | 10643 | 7649773 ~ 7657652 (+) | False | LOC120560946 |
| XM_039804516.1 | mRNA | downstream | 19042 | 7658172 ~ 7663129 (+) | True | gucd1 |
| XM_039803852.1 | mRNA | downstream | 182175 | 7821305 ~ 7845805 (+) | True | ift81 |
| XM_039803270.1 | mRNA | downstream | 208541 | 7847671 ~ 7877124 (+) | True | atp2a2a |
| TU80342 | other | upstream | 3618 | 7625807 ~ 7629074 (+) | False | zbtb26 |
| XR_005639484.1 | other | upstream | 8993 | 7600093 ~ 7623699 (+) | False | susd1 |
| TU80145 | other | upstream | 655890 | 6969133 ~ 6976802 (+) | False | add2 |
| TU79987 | other | upstream | 955208 | 6674917 ~ 6677484 (+) | False | kat6a |
| TU79733 | other | upstream | 2134938 | 5495155 ~ 5497754 (+) | True | G59347 |
| XR_005639603.1 | other | downstream | 45515 | 7684645 ~ 7684763 (+) | True | LOC120561481 |
| XR_005639604.1 | other | downstream | 51544 | 7690674 ~ 7690792 (+) | True | LOC120561492 |
| XR_005639610.1 | other | downstream | 53961 | 7693091 ~ 7693209 (+) | True | LOC120561498 |
| XR_005639608.1 | other | downstream | 58797 | 7697927 ~ 7698045 (+) | True | LOC120561496 |
| XR_005639609.1 | other | downstream | 60003 | 7699133 ~ 7699251 (+) | True | LOC120561497 |
