Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU70208 |
| length | 856 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G59338 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 4663611 ~ 4664466 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU70170 | lncRNA | upstream | 108012 | 4555395 ~ 4555599 (+) | True | G59304 |
| TU69979 | lncRNA | upstream | 276805 | 4049152 ~ 4386806 (+) | False | LOC117597054 |
| TU70012 | lncRNA | upstream | 291054 | 4372121 ~ 4372557 (+) | False | LOC117597054 |
| TU70002 | lncRNA | upstream | 367146 | 4293289 ~ 4296465 (+) | False | LOC113547236 |
| XR_004578031.1 | lncRNA | upstream | 545021 | 4117786 ~ 4118590 (+) | True | LOC117597097 |
| TU70213 | lncRNA | downstream | 1546 | 4666012 ~ 4666455 (+) | True | G59340 |
| TU70215 | lncRNA | downstream | 5397 | 4669863 ~ 4670083 (+) | True | G59342 |
| TU70216 | lncRNA | downstream | 6514 | 4670980 ~ 4671460 (+) | True | G59343 |
| TU70198 | lncRNA | downstream | 12701 | 4677167 ~ 4680239 (+) | True | G59329 |
| TU70199 | lncRNA | downstream | 12701 | 4677167 ~ 4698795 (+) | False | G59329 |
| XM_026947464.2 | mRNA | upstream | 110573 | 4532921 ~ 4553038 (+) | False | shrprbck1r |
| XM_026947463.2 | mRNA | upstream | 110573 | 4532922 ~ 4553038 (+) | False | shrprbck1r |
| XM_034303800.1 | mRNA | upstream | 150148 | 4475196 ~ 4513463 (+) | True | LOC117597089 |
| XM_026947552.2 | mRNA | downstream | 75104 | 4739570 ~ 4746302 (+) | True | mnx1 |
| XM_034303594.1 | mRNA | downstream | 109720 | 4774186 ~ 4789253 (+) | True | LOC113547242 |
| XM_034303595.1 | mRNA | downstream | 141188 | 4805654 ~ 4866411 (+) | True | LOC113547214 |
| XM_026947547.2 | mRNA | downstream | 215334 | 4879800 ~ 4894423 (+) | True | si:ch211-188c16.1 |
| XM_026947564.2 | mRNA | downstream | 232502 | 4896968 ~ 4913622 (+) | True | LOC113547295 |
| XR_004578071.1 | other | upstream | 10490 | 4650477 ~ 4653121 (+) | True | LOC117597167 |
| XR_003404798.2 | other | upstream | 110573 | 4532921 ~ 4553038 (+) | True | shrprbck1r |
| XR_004578033.1 | other | upstream | 657270 | 4005153 ~ 4006341 (+) | True | LOC117597099 |
| TU69947 | other | upstream | 811044 | 3850423 ~ 3852567 (+) | False | LOC113545588 |
| TU69928 | other | upstream | 933263 | 3728456 ~ 3730348 (+) | False | LOC113547237 |
| TU70239 | other | downstream | 42976 | 4707442 ~ 4708398 (+) | True | G59366 |
| TU70376 | other | downstream | 290669 | 4955135 ~ 4955462 (+) | False | LOC113547245 |
| TU70397 | other | downstream | 309729 | 4974195 ~ 5008133 (+) | True | G59492 |
| XR_004578077.1 | other | downstream | 515096 | 5179562 ~ 5188046 (+) | False | LOC113547261 |
| TU70896 | other | downstream | 915678 | 5580144 ~ 5596126 (+) | False | LOC113547291 |
