Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU125667 |
| length | 1189 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G106265 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 27965063 ~ 27966251 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU125666 | lncRNA | downstream | 1053 | 27963771 ~ 27964010 (-) | True | G106264 |
| TU125662 | lncRNA | downstream | 10584 | 27954264 ~ 27954479 (-) | True | G106260 |
| TU125661 | lncRNA | downstream | 11073 | 27953518 ~ 27953990 (-) | True | G106259 |
| TU125660 | lncRNA | downstream | 20030 | 27944816 ~ 27945033 (-) | True | G106258 |
| TU125592 | lncRNA | downstream | 60034 | 27861840 ~ 27905029 (-) | True | G106195 |
| TU125671 | lncRNA | upstream | 1731 | 27967982 ~ 27968201 (-) | True | G106269 |
| TU125726 | lncRNA | upstream | 71839 | 28038090 ~ 28078875 (-) | True | G106319 |
| TU125749 | lncRNA | upstream | 103348 | 28069599 ~ 28070870 (-) | True | G106336 |
| TU125776 | lncRNA | upstream | 131522 | 28097773 ~ 28097994 (-) | True | G106356 |
| XR_004578301.1 | lncRNA | upstream | 293446 | 28259697 ~ 28261304 (-) | True | LOC117597514 |
| XM_026914328.2 | mRNA | downstream | 25241 | 27925890 ~ 27939822 (-) | True | LOC113526894 |
| XM_026913761.2 | mRNA | downstream | 86444 | 27865109 ~ 27878619 (-) | True | zdhhc7 |
| XM_026913760.2 | mRNA | downstream | 86445 | 27865109 ~ 27878618 (-) | False | zdhhc7 |
| XM_026914111.2 | mRNA | downstream | 105702 | 27854836 ~ 27859361 (-) | True | cog8 |
| XM_034305151.1 | mRNA | downstream | 118241 | 27825324 ~ 27846822 (-) | True | wdr59 |
| XM_026913729.2 | mRNA | upstream | 217282 | 28183533 ~ 28205626 (-) | False | LOC113526564 |
| XM_026913728.2 | mRNA | upstream | 217282 | 28183533 ~ 28205624 (-) | True | LOC113526564 |
| XM_026913722.2 | mRNA | upstream | 263187 | 28229438 ~ 28233387 (-) | True | foxf1 |
| XM_026914417.2 | mRNA | upstream | 448884 | 28415135 ~ 28422985 (-) | True | irf8 |
| XM_026914419.2 | mRNA | upstream | 457546 | 28423797 ~ 28446913 (-) | True | dusp22a |
| TU125182 | other | downstream | 807923 | 27152312 ~ 27157140 (-) | False | si:dkey-151j17.4 |
| TU124747 | other | downstream | 1356734 | 26569085 ~ 26608329 (-) | False | LOC113526510 |
| TU124615 | other | downstream | 1724058 | 26239330 ~ 26241005 (-) | True | G105376 |
| XR_003402762.2 | other | downstream | 2416135 | 25385325 ~ 25548928 (-) | True | si:cabz01090165.1 |
| TU126682 | other | upstream | 1735901 | 29702152 ~ 29713992 (-) | False | hipk3b |
| TU127077 | other | upstream | 2377280 | 30343531 ~ 30344876 (-) | True | G107525 |
| TU127397 | other | upstream | 2763707 | 30729958 ~ 30732031 (-) | False | bbs10 |
| TU127465 | other | upstream | 2850328 | 30816579 ~ 30819614 (-) | True | G107803 |
