Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU26768 |
| length | 210 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G22478 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 6229760 ~ 6229969 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU26749 | lncRNA | downstream | 21106 | 6205284 ~ 6208654 (-) | True | LOC113546630 |
| TU26760 | lncRNA | downstream | 80593 | 6148946 ~ 6149167 (-) | True | G22470 |
| TU26653 | lncRNA | downstream | 186008 | 6043116 ~ 6043752 (-) | True | G22367 |
| TU26629 | lncRNA | downstream | 239565 | 5989970 ~ 5990195 (-) | True | G22345 |
| TU26606 | lncRNA | downstream | 264577 | 5957026 ~ 5965183 (-) | False | blcap |
| TU26833 | lncRNA | upstream | 53146 | 6283115 ~ 6283948 (-) | True | G22539 |
| TU26832 | lncRNA | upstream | 68153 | 6298122 ~ 6301047 (-) | True | G22538 |
| TU26972 | lncRNA | upstream | 391966 | 6621935 ~ 6622442 (-) | True | G22650 |
| TU27022 | lncRNA | upstream | 445511 | 6675480 ~ 6675687 (-) | True | G22695 |
| TU27026 | lncRNA | upstream | 453485 | 6683454 ~ 6683730 (-) | True | G22699 |
| XM_026946617.2 | mRNA | downstream | 21094 | 6205304 ~ 6208666 (-) | False | LOC113546630 |
| XM_026921377.2 | mRNA | downstream | 34572 | 6181028 ~ 6195188 (-) | True | tomm34 |
| XM_026921368.2 | mRNA | downstream | 34578 | 6181028 ~ 6195182 (-) | False | tomm34 |
| XM_034312125.1 | mRNA | downstream | 69086 | 6151401 ~ 6160674 (-) | True | LOC117599288 |
| XM_026927486.2 | mRNA | downstream | 111192 | 6055822 ~ 6118568 (-) | True | rims4 |
| XM_026915885.2 | mRNA | upstream | 75203 | 6305172 ~ 6313411 (-) | True | eif6 |
| XM_026935885.2 | mRNA | upstream | 94145 | 6324114 ~ 6362835 (-) | True | mmp24 |
| XM_026926155.2 | mRNA | upstream | 170447 | 6400416 ~ 6413610 (-) | True | fam83c |
| XM_026923858.2 | mRNA | upstream | 203950 | 6433919 ~ 6462290 (-) | True | LOC113532448 |
| XM_034311409.1 | mRNA | upstream | 273552 | 6503521 ~ 6516423 (-) | True | gdf5 |
| XR_004577391.1 | other | downstream | 152883 | 6074035 ~ 6076877 (-) | False | LOC117596222 |
| TU26421 | other | downstream | 693700 | 5534124 ~ 5536060 (-) | False | romo1 |
| TU26420 | other | downstream | 693753 | 5534124 ~ 5536007 (-) | False | romo1 |
| XR_003403146.2 | other | downstream | 1028548 | 5111462 ~ 5201212 (-) | True | LOC113530384 |
| TU26888 | other | upstream | 249433 | 6479402 ~ 6480011 (-) | True | G22591 |
| XR_004580309.1 | other | upstream | 2032650 | 8262619 ~ 8265229 (-) | False | mitfa |
| TU28034 | other | upstream | 2251082 | 8481051 ~ 8484029 (-) | False | tcta |
| TU28035 | other | upstream | 2251082 | 8481051 ~ 8484181 (-) | False | tcta |
| TU28036 | other | upstream | 2251082 | 8481051 ~ 8484114 (-) | False | tcta |
