Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU26629 |
| length | 226 |
| lncRNA type | inter_gene |
| GC content | 0.57 |
| exon number | 1 |
| gene id | G22345 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 5989970 ~ 5990195 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU26607 | lncRNA | downstream | 24787 | 5956639 ~ 5965183 (-) | True | blcap |
| TU26606 | lncRNA | downstream | 24787 | 5957026 ~ 5965183 (-) | False | blcap |
| TU26608 | lncRNA | downstream | 24787 | 5957026 ~ 5965183 (-) | False | blcap |
| XR_004577038.1 | lncRNA | downstream | 99138 | 5889282 ~ 5890832 (-) | True | LOC117595835 |
| TU26515 | lncRNA | downstream | 119269 | 5870500 ~ 5870701 (-) | True | G22237 |
| TU26653 | lncRNA | upstream | 52921 | 6043116 ~ 6043752 (-) | True | G22367 |
| TU26760 | lncRNA | upstream | 158751 | 6148946 ~ 6149167 (-) | True | G22470 |
| TU26749 | lncRNA | upstream | 215089 | 6205284 ~ 6208654 (-) | True | LOC113546630 |
| TU26768 | lncRNA | upstream | 239565 | 6229760 ~ 6229969 (-) | True | G22478 |
| TU26833 | lncRNA | upstream | 292920 | 6283115 ~ 6283948 (-) | True | G22539 |
| XM_026937756.2 | mRNA | downstream | 598 | 5982584 ~ 5989372 (-) | True | psmf1 |
| XM_034300835.1 | mRNA | downstream | 24827 | 5957016 ~ 5965143 (-) | False | blcap |
| XM_026920539.2 | mRNA | downstream | 24834 | 5957016 ~ 5965136 (-) | False | blcap |
| XM_026919444.2 | mRNA | downstream | 126537 | 5761737 ~ 5863433 (-) | False | chd6 |
| XM_026919428.2 | mRNA | downstream | 126537 | 5761737 ~ 5863433 (-) | True | chd6 |
| XM_026927486.2 | mRNA | upstream | 65627 | 6055822 ~ 6118568 (-) | True | rims4 |
| XM_034300540.1 | mRNA | upstream | 83840 | 6074035 ~ 6076877 (-) | True | LOC117596222 |
| XM_034312125.1 | mRNA | upstream | 161206 | 6151401 ~ 6160674 (-) | True | LOC117599288 |
| XM_026921377.2 | mRNA | upstream | 190833 | 6181028 ~ 6195188 (-) | True | tomm34 |
| XM_026921368.2 | mRNA | upstream | 190833 | 6181028 ~ 6195182 (-) | False | tomm34 |
| TU26421 | other | downstream | 453910 | 5534124 ~ 5536060 (-) | False | romo1 |
| TU26420 | other | downstream | 453963 | 5534124 ~ 5536007 (-) | False | romo1 |
| XR_003403149.2 | other | downstream | 788758 | 5111462 ~ 5201212 (-) | False | LOC113530384 |
| XR_004577391.1 | other | upstream | 83840 | 6074035 ~ 6076877 (-) | False | LOC117596222 |
| TU26888 | other | upstream | 489207 | 6479402 ~ 6480011 (-) | True | G22591 |
| XR_004580309.1 | other | upstream | 2272424 | 8262619 ~ 8265229 (-) | False | mitfa |
| TU28034 | other | upstream | 2490856 | 8481051 ~ 8484029 (-) | False | tcta |
| TU28035 | other | upstream | 2490856 | 8481051 ~ 8484181 (-) | False | tcta |
