Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00007980 |
| length | 964 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | XLOC_004175 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 27817301 ~ 27827533 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0005848 | mRNA cleavage stimulating factor complex | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-030131-2958 | Predicted to be part of mRNA cleavage stimulating factor complex. Orthologous to human CSTF1 (cleavage stimulation factor subunit 1). |
| ensembl_id | ENSDART00000145744 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008474 | lncRNA | downstream | 10909 | 27800859 ~ 27809715 (-) | True | XLOC_004174 |
| TCONS_00007976 | lncRNA | downstream | 13857 | 27783758 ~ 27806767 (-) | True | XLOC_004173 |
| TCONS_00008473 | lncRNA | downstream | 114024 | 27705970 ~ 27706600 (-) | False | XLOC_004171 |
| TCONS_00008801 | lncRNA | downstream | 195169 | 27592643 ~ 27625455 (-) | True | XLOC_004169 |
| TCONS_00007969 | lncRNA | downstream | 195499 | 27592643 ~ 27625125 (-) | False | XLOC_004169 |
| TCONS_00007985 | lncRNA | upstream | 1758 | 27829230 ~ 27830335 (-) | False | XLOC_004176 |
| TCONS_00007993 | lncRNA | upstream | 251171 | 28078643 ~ 28079691 (-) | False | XLOC_004178 |
| TCONS_00007994 | lncRNA | upstream | 251171 | 28078643 ~ 28079704 (-) | True | XLOC_004178 |
| TCONS_00008802 | lncRNA | upstream | 299785 | 28127257 ~ 28390101 (-) | False | XLOC_004179 |
| TCONS_00008803 | lncRNA | upstream | 369485 | 28196957 ~ 28200504 (-) | True | XLOC_004180 |
| TCONS_00007975 | mRNA | downstream | 41793 | 27745618 ~ 27778831 (-) | True | XLOC_004172 |
| TCONS_00007972 | mRNA | downstream | 81575 | 27705030 ~ 27739049 (-) | False | XLOC_004171 |
| TCONS_00007973 | mRNA | downstream | 82135 | 27706579 ~ 27738489 (-) | False | XLOC_004171 |
| TCONS_00007971 | mRNA | downstream | 117789 | 27646675 ~ 27702835 (-) | True | XLOC_004170 |
| TCONS_00007970 | mRNA | downstream | 117846 | 27644524 ~ 27702778 (-) | False | XLOC_004170 |
| TCONS_00007982 | mRNA | upstream | 740 | 27828212 ~ 27867024 (-) | False | XLOC_004176 |
| TCONS_00007983 | mRNA | upstream | 740 | 27828212 ~ 27867111 (-) | False | XLOC_004176 |
| TCONS_00007984 | mRNA | upstream | 1358 | 27828830 ~ 27917730 (-) | False | XLOC_004176 |
| TCONS_00007986 | mRNA | upstream | 7142 | 27834614 ~ 27838621 (-) | False | XLOC_004176 |
| TCONS_00007987 | mRNA | upstream | 45271 | 27872743 ~ 27874116 (-) | True | XLOC_004176 |
| TCONS_00007974 | other | downstream | 101355 | 27713464 ~ 27719269 (-) | True | XLOC_004171 |
| TCONS_00007964 | other | downstream | 317304 | 27503232 ~ 27503320 (-) | True | XLOC_004167 |
| TCONS_00007963 | other | downstream | 317492 | 27503017 ~ 27503132 (-) | False | XLOC_004167 |
| TCONS_00007960 | other | downstream | 1072195 | 26748292 ~ 26748429 (-) | True | XLOC_004165 |
| TCONS_00007954 | other | downstream | 1243415 | 26569531 ~ 26577209 (-) | True | XLOC_004161 |
| TCONS_00007992 | other | upstream | 250676 | 28078148 ~ 28086924 (-) | False | XLOC_004178 |
| TCONS_00008006 | other | upstream | 763416 | 28590888 ~ 28595428 (-) | True | XLOC_004184 |
| TCONS_00008022 | other | upstream | 1825218 | 29652690 ~ 29657852 (-) | False | XLOC_004191 |
| TCONS_00008030 | other | upstream | 1982225 | 29809697 ~ 29816202 (-) | False | XLOC_004195 |
| TCONS_00008033 | other | upstream | 2068900 | 29896372 ~ 29909625 (-) | False | XLOC_004196 |
