Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU425321 |
| length | 1078 |
| RNA type | TUCP |
| GC content | 0.55 |
| exon number | 5 |
| gene id | igdcc4 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047619.1 |
| NCBI id | CM018565.1 |
| chromosome length | 19570078 |
| location | 2636289 ~ 2694287 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU425292 | lncRNA | upstream | 44018 | 2592064 ~ 2592271 (+) | True | G358965 |
| TU425227 | lncRNA | upstream | 201999 | 2434081 ~ 2434290 (+) | True | G358908 |
| TU425218 | lncRNA | upstream | 249113 | 2385298 ~ 2387176 (+) | True | G358903 |
| TU425219 | lncRNA | upstream | 249113 | 2385298 ~ 2387176 (+) | False | G358903 |
| TU425220 | lncRNA | upstream | 249113 | 2385298 ~ 2387176 (+) | False | G358903 |
| TU425687 | lncRNA | downstream | 29533 | 2694474 ~ 2696538 (+) | True | G359293 |
| TU425686 | lncRNA | downstream | 29929 | 2694870 ~ 2696538 (+) | False | G359293 |
| TU425722 | lncRNA | downstream | 120686 | 2785627 ~ 2809785 (+) | False | cilp |
| TU425723 | lncRNA | downstream | 127362 | 2792303 ~ 2823338 (+) | False | cilp |
| TU425729 | lncRNA | downstream | 166342 | 2831283 ~ 2832473 (+) | True | G359324 |
| XM_026937592.2 | mRNA | upstream | 8645 | 2613532 ~ 2627644 (+) | False | nap1l4b |
| XM_026937595.2 | mRNA | upstream | 8645 | 2613533 ~ 2627644 (+) | True | nap1l4b |
| XM_026937594.2 | mRNA | upstream | 8645 | 2613649 ~ 2627644 (+) | False | nap1l4b |
| XM_034299682.1 | mRNA | upstream | 8645 | 2613747 ~ 2627644 (+) | False | nap1l4b |
| XM_026937750.2 | mRNA | upstream | 26115 | 2586847 ~ 2610174 (+) | True | rfx7a |
| XM_026937461.2 | mRNA | downstream | 38564 | 2703505 ~ 2769648 (+) | True | igdcc3 |
| XM_026937555.2 | mRNA | downstream | 120708 | 2785649 ~ 2822968 (+) | True | cilp |
| XM_026937712.2 | mRNA | downstream | 524443 | 3189384 ~ 3192531 (+) | True | terb2 |
| XM_026937713.2 | mRNA | downstream | 524444 | 3189385 ~ 3192531 (+) | False | terb2 |
| XM_026937714.2 | mRNA | downstream | 525301 | 3190242 ~ 3192531 (+) | False | terb2 |
| TU425115 | other | upstream | 297531 | 2321171 ~ 2338758 (+) | False | c25h16orf87 |
| XR_004577234.1 | other | upstream | 731698 | 1890574 ~ 1904591 (+) | True | LOC117596061 |
| TU424567 | other | upstream | 2197403 | 426896 ~ 438886 (+) | False | cmtm4 |
| TU424577 | other | upstream | 2284520 | 348769 ~ 351769 (+) | False | ccne1 |
| TU426380 | other | downstream | 1058085 | 3723026 ~ 3729877 (+) | False | cylda |
| TU426382 | other | downstream | 1076845 | 3741786 ~ 3745457 (+) | False | cylda |
| XR_004577248.1 | other | downstream | 1921671 | 4586612 ~ 4764886 (+) | False | fto |
| XR_003404141.1 | other | downstream | 3344652 | 6009593 ~ 6009707 (+) | True | LOC113541027 |
| XR_003404143.2 | other | downstream | 3345633 | 6010574 ~ 6010688 (+) | True | LOC113541029 |
