Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU427088 |
| length | 221 |
| lncRNA type | inter_gene |
| GC content | 0.29 |
| exon number | 1 |
| gene id | G360540 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047619.1 |
| NCBI id | CM018565.1 |
| chromosome length | 19570078 |
| location | 5410427 ~ 5410647 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU426980 | lncRNA | upstream | 360526 | 5048460 ~ 5049901 (+) | True | G360442 |
| TU426981 | lncRNA | upstream | 362765 | 5047176 ~ 5047662 (+) | True | G360443 |
| TU426969 | lncRNA | upstream | 464017 | 4946207 ~ 4946410 (+) | True | G360433 |
| TU426767 | lncRNA | upstream | 751069 | 4615154 ~ 4659358 (+) | True | G360245 |
| TU426705 | lncRNA | upstream | 952523 | 4457681 ~ 4457904 (+) | True | G360191 |
| TU427114 | lncRNA | downstream | 105561 | 5516208 ~ 5553167 (+) | True | G360565 |
| TU427149 | lncRNA | downstream | 244678 | 5655325 ~ 5655815 (+) | True | G360590 |
| TU427151 | lncRNA | downstream | 249538 | 5660185 ~ 5660502 (+) | True | G360592 |
| TU427156 | lncRNA | downstream | 254639 | 5665286 ~ 5665521 (+) | True | G360597 |
| TU427481 | lncRNA | downstream | 561017 | 5971664 ~ 5972079 (+) | True | G360892 |
| XM_026937530.2 | mRNA | upstream | 19286 | 5367548 ~ 5391141 (+) | True | slc12a4 |
| XM_034299676.1 | mRNA | upstream | 66455 | 5316526 ~ 5343972 (+) | True | slc6a2 |
| XM_026937573.2 | mRNA | upstream | 68232 | 5315829 ~ 5342195 (+) | False | slc6a2 |
| XM_026937759.2 | mRNA | upstream | 104346 | 5293211 ~ 5306081 (+) | True | lpcat2 |
| XM_026937487.2 | mRNA | upstream | 123239 | 5267872 ~ 5287188 (+) | True | mmp2 |
| XM_026937585.2 | mRNA | downstream | 89328 | 5499975 ~ 5517575 (+) | True | hsd11b2 |
| XM_026937704.2 | mRNA | downstream | 129066 | 5539713 ~ 5543335 (+) | True | agrp |
| XM_026937703.2 | mRNA | downstream | 129588 | 5540235 ~ 5543335 (+) | False | agrp |
| XM_026937705.2 | mRNA | downstream | 129588 | 5540235 ~ 5543335 (+) | False | agrp |
| XM_026937404.2 | mRNA | downstream | 162562 | 5573209 ~ 5606016 (+) | True | galr1b |
| XR_004577248.1 | other | upstream | 645541 | 4586612 ~ 4764886 (+) | False | fto |
| TU426382 | other | upstream | 1664970 | 3741786 ~ 3745457 (+) | False | cylda |
| TU426380 | other | upstream | 1680550 | 3723026 ~ 3729877 (+) | False | cylda |
| TU425321 | other | upstream | 2745486 | 2636289 ~ 2664941 (+) | False | igdcc4 |
| TU425115 | other | upstream | 3071669 | 2321171 ~ 2338758 (+) | False | c25h16orf87 |
| XR_003404141.1 | other | downstream | 598946 | 6009593 ~ 6009707 (+) | True | LOC113541027 |
| XR_003404143.2 | other | downstream | 599927 | 6010574 ~ 6010688 (+) | True | LOC113541029 |
| XR_003404142.2 | other | downstream | 601119 | 6011766 ~ 6011878 (+) | True | LOC113541028 |
| trnar-ucg_10 | other | downstream | 1720677 | 7131324 ~ 7131396 (+) | True | trnar-ucg_10 |
| XR_004577258.1 | other | downstream | 3447447 | 8858094 ~ 8860313 (+) | True | LOC117596088 |
