Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00002233 |
| length | 1242 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 1 |
| gene id | AMCG00002233 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030136.1 |
| NCBI id | CM030136.1 |
| chromosome length | 27394605 |
| location | 8012977 ~ 8014218 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0006486 | protein glycosylation | biological_process |
| GO:0005794 | Golgi apparatus | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0008378 | galactosyltransferase activity | molecular_function |
| id | description |
|---|---|
| K09664 | B3GNT7; beta-1,3-N-acetylglucosaminyltransferase 7 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU152604 | lncRNA | downstream | 167661 | 7830193 ~ 7845316 (-) | True | G121754 |
| TU152558 | lncRNA | downstream | 349300 | 7662986 ~ 7663677 (-) | True | G121718 |
| TU152556 | lncRNA | downstream | 354126 | 7657832 ~ 7658851 (-) | True | G121716 |
| TU152525 | lncRNA | downstream | 450230 | 7561077 ~ 7562747 (-) | True | G121689 |
| TU152218 | lncRNA | downstream | 1588679 | 6420041 ~ 6424298 (-) | True | G121447 |
| TU152667 | lncRNA | upstream | 1846 | 8016064 ~ 8017075 (-) | True | G121789 |
| TU152800 | lncRNA | upstream | 811213 | 8825431 ~ 8859003 (-) | True | G121875 |
| TU152811 | lncRNA | upstream | 854427 | 8868645 ~ 8870698 (-) | True | G121885 |
| TU152845 | lncRNA | upstream | 917945 | 8932163 ~ 8933163 (-) | True | G121912 |
| TU152874 | lncRNA | upstream | 1003908 | 9018126 ~ 9018327 (-) | True | G121935 |
| AMCG00002226 | mRNA | downstream | 33895 | 7969903 ~ 7979082 (-) | True | AMCG00002226 |
| AMCG00002227 | mRNA | downstream | 67960 | 7938460 ~ 7945017 (-) | True | AMCG00002227 |
| AMCG00002229 | mRNA | downstream | 105399 | 7907035 ~ 7907578 (-) | True | AMCG00002229 |
| AMCG00002228 | mRNA | downstream | 111311 | 7888312 ~ 7901666 (-) | True | AMCG00002228 |
| AMCG00002230 | mRNA | downstream | 141481 | 7870894 ~ 7871496 (-) | True | AMCG00002230 |
| AMCG00002234 | mRNA | upstream | 8459 | 8022677 ~ 8027024 (-) | True | AMCG00002234 |
| AMCG00002237 | mRNA | upstream | 481864 | 8496082 ~ 8522830 (-) | True | AMCG00002237 |
| AMCG00002238 | mRNA | upstream | 692311 | 8706529 ~ 8708937 (-) | True | AMCG00002238 |
| AMCG00002239 | mRNA | upstream | 698247 | 8712465 ~ 8720117 (-) | True | AMCG00002239 |
| AMCG00002240 | mRNA | upstream | 796101 | 8810319 ~ 8813591 (-) | True | AMCG00002240 |
| TU152605 | other | downstream | 173566 | 7836495 ~ 7839411 (-) | True | AMCG00002223 |
| TU151612 | other | downstream | 3793100 | 4214715 ~ 4219877 (-) | True | G120993 |
| TU151529 | other | downstream | 4226433 | 3784236 ~ 3786544 (-) | True | G120927 |
| TU151499 | other | downstream | 4296725 | 3713867 ~ 3716252 (-) | True | G120907 |
| TU151364 | other | downstream | 4885033 | 3113442 ~ 3127944 (-) | True | AMCG00002094 |
| TU153137 | other | upstream | 1817693 | 9831911 ~ 9833224 (-) | True | AMCG00002276 |
| TU153139 | other | upstream | 1827877 | 9842095 ~ 9853075 (-) | False | AMCG00002279 |
| TU153575 | other | upstream | 3510675 | 11524893 ~ 11527355 (-) | False | AMCG00002317 |
| TU153660 | other | upstream | 3653537 | 11667755 ~ 11685089 (-) | False | AMCG00002327 |
| TU153720 | other | upstream | 3717399 | 11731617 ~ 11734324 (-) | True | G122597 |
