RNA id: AMCG00002556



Basic Information


Item Value
RNA id AMCG00002556
length 282
RNA type mRNA
GC content 0.54
exon number 1
gene id AMCG00002556
representative True

Chromosome Information


Item Value
chromosome id CM030136.1
NCBI id CM030136.1
chromosome length 27394605
location 18786673 ~ 18786954 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGAGGAAGGTTGGGTTTGGCAGAGCATCGTCAGGAGTCATCCAGCTGCTGGACTGGTTTCAGCGGGAGAACGAATTCCTCCTTGTCCTGGAGCGGCCTGAGCCGTGCAAGGACCTGTTGAGTTATTCTCGGCACCTAGGACACTGCCTGGAGGAGGCTGAGGCAAGGAGCTTCATGCAGCAGCTAATTAAGATCATACAGCACTGCCACAAGAGACATGTCCTGCACGGAGATGTCAAGGCCGAGAACATCCTTGTCGAGTTGGACACCGGCAAGATCTAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU155446 lncRNA downstream 4307 18782145 ~ 18782366 (-) True G123981
TU155412 lncRNA downstream 200743 18584709 ~ 18585930 (-) True G123961
TU155370 lncRNA downstream 317066 18469234 ~ 18469607 (-) True G123926
TU155304 lncRNA downstream 580541 18205668 ~ 18206132 (-) True G123876
TU155273 lncRNA downstream 734341 18051097 ~ 18052332 (-) True G123845
TU155557 lncRNA upstream 496924 19283878 ~ 19284293 (-) True G124068
TU155687 lncRNA upstream 1515118 20302072 ~ 20334454 (-) True G124175
TU155736 lncRNA upstream 1753353 20540307 ~ 20540523 (-) True G124222
TU155844 lncRNA upstream 2192143 20979097 ~ 21116735 (-) True G124327
TU155898 lncRNA upstream 2860101 21647055 ~ 21678545 (-) True AMCG00002584
AMCG00002557 mRNA downstream 32 18786120 ~ 18786641 (-) True AMCG00002557
AMCG00002551 mRNA downstream 27087 18723397 ~ 18759586 (-) True AMCG00002551
AMCG00002548 mRNA downstream 73582 18701895 ~ 18713091 (-) True AMCG00002548
AMCG00002552 mRNA downstream 153843 18629649 ~ 18632830 (-) True AMCG00002552
AMCG00002547 mRNA downstream 184565 18586078 ~ 18602108 (-) True AMCG00002547
AMCG00002555 mRNA upstream 84409 18871363 ~ 18895560 (-) True AMCG00002555
AMCG00002554 mRNA upstream 113319 18900273 ~ 18978957 (-) True AMCG00002554
AMCG00002560 mRNA upstream 346241 19133195 ~ 19160336 (-) True AMCG00002560
AMCG00002559 mRNA upstream 384565 19171519 ~ 19174613 (-) True AMCG00002559
AMCG00002558 mRNA upstream 461676 19248630 ~ 19258630 (-) True AMCG00002558
TU155250 other downstream 797208 17922452 ~ 17989465 (-) True G123829
TU154950 other downstream 1946951 16836156 ~ 16839722 (-) True G123585
TU154543 other downstream 3840362 14941260 ~ 14946311 (-) True G123263
TU154299 other downstream 5132437 13649228 ~ 13654236 (-) False AMCG00002421
TU154047 other downstream 5757267 13028197 ~ 13029406 (-) True G122862
TU156333 other upstream 4299040 23085994 ~ 23153164 (-) True G124719
TU156342 other upstream 4394967 23181921 ~ 23185168 (-) True AMCG00002629
TU156457 other upstream 5474611 24261565 ~ 24261823 (-) True G124829
TU156479 other upstream 5504833 24291787 ~ 24339566 (-) True G124848
TU156949 other upstream 7516928 26303882 ~ 26305923 (-) False AMCG00002688