RNA id: AMCG00003391


Basic Information

Item Value
RNA id AMCG00003391
length 948
RNA type mRNA
GC content 0.46
exon number 1
gene id AMCG00003391
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 538794 ~ 539741 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTCTACCAACGTTCAGCCATGAGGTCAGCCATCAACATTCTCCTCGCCAGCCTGGCCTTTGCTGACATGATGTTGGCTGTTTTAAACATGCCCTTTGCACTGGTCACTGTTATCACCACTCAATGGATCTTTGGAGACGTATTCTGCAAAGTGTCAGCTATGTTCTTTTGGCTTTTTGTAATGGAAGGAGTGGCGATCTTACTTATCATTAGCATCGACAGGTTTCTTATAATTGTTCAGAAACAAGACAAGCTAAGCCCCTACAGGGCTAAAGTGCTTATAGGTATATCCTGGGGCATATCGTTCTGTTTCTCATTCCCCTTGGCCATTGGGAAACCCAACCTGCAGATTCCCTCCAGGGCTCCACAGTGTGTGTTTGGCTACACCACAGAGCCAGGCTACCATACTTACGTGGTcctcataattttttttttttttctcattccatTCATGATCATGCTGTACACCTTCATGGGCATCCTGAATACTGTACGCCACAATGCCATCCGAATCCATAGTCACCCTGACACCATCTGCCTCAGTCAGGCAAGTAAGCTGGGTCTCATGAGCTTGCAGAAGCCTTTCCAGATGAACATAGACATGAGCTTCAAGACACGTGCCTTTACAACTATACTGATTCTGTTTGCAGTTTTCACAGTGTGCTGGGCTCCTTTCACAACCTATAGCCTGGTTTCCACCTTCAGCAGTGGCTTTTATTACAAGACTGACTTCTTTGAAATTAGCACCTGGCTTCTCTGGTTAAGCTACCTCAAGTCAGCACTCAACCCTCTTATTTATTACTGGAGGATCAAGAAGTTTCGAGATGCCTGCCTAGACTTAATGCCCAAGTTCTTCAAGTTCATCCCCCAGTTGCCAGGCCACACAAGGAGGCGCATTCGGCCAAGTGCCATCTATGTTTGTGGAGAGCACCGATCTGTGGTATAG

Function

GO: NA

KEGG:

id description
K04321 GPR63; G protein-coupled receptor 63

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU109 lncRNA downstream 52894 485584 ~ 485900 (-) True G89
TU135 lncRNA upstream 74450 614191 ~ 615637 (-) False G112
TU137 lncRNA upstream 74729 614470 ~ 615637 (-) False G112
TU136 lncRNA upstream 74828 614569 ~ 616320 (-) True G112
TU150 lncRNA upstream 195025 734766 ~ 769986 (-) True G122
TU205 lncRNA upstream 405497 945238 ~ 957196 (-) True AMCG00003400
AMCG00003390 mRNA downstream 298281 232621 ~ 240513 (-) True AMCG00003390
AMCG00003389 mRNA downstream 461286 62457 ~ 77508 (-) True AMCG00003389
AMCG00003392 mRNA upstream 54534 594275 ~ 597178 (-) True AMCG00003392
AMCG00003393 mRNA upstream 79825 619566 ~ 627690 (-) True AMCG00003393
AMCG00003394 mRNA upstream 120787 660528 ~ 664276 (-) True AMCG00003394
AMCG00003399 mRNA upstream 131620 671361 ~ 802713 (-) True AMCG00003399
AMCG00003401 mRNA upstream 379571 919312 ~ 930578 (-) True AMCG00003401
TU425 other upstream 1857901 2397642 ~ 2401895 (-) False AMCG00003423
TU426 other upstream 1857901 2397642 ~ 2401895 (-) True AMCG00003423
TU462 other upstream 1897986 2437727 ~ 2438821 (-) False AMCG00003422
TU643 other upstream 2854916 3394657 ~ 3430272 (-) True G531
TU920 other upstream 4111030 4650771 ~ 4661367 (-) False AMCG00003476

Expression Profile