Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004318 |
| length | 1377 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 9 |
| gene id | AMCG00004318 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 42732816 ~ 42736569 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016020 | membrane | cellular_component |
| id | description |
|---|---|
| K23544 | SERINC1_3; serine incorporator 1/3 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU8944 | lncRNA | upstream | 256930 | 42475576 ~ 42475886 (+) | True | G7293 |
| TU8939 | lncRNA | upstream | 352855 | 42376625 ~ 42379961 (+) | True | G7288 |
| TU8928 | lncRNA | upstream | 367162 | 42364868 ~ 42365654 (+) | True | G7278 |
| TU8918 | lncRNA | upstream | 396173 | 42333425 ~ 42336643 (+) | True | G7272 |
| TU8872 | lncRNA | upstream | 643163 | 42087791 ~ 42089653 (+) | True | G7231 |
| TU9117 | lncRNA | downstream | 499249 | 43235818 ~ 43237653 (+) | True | G7418 |
| TU9148 | lncRNA | downstream | 609781 | 43346350 ~ 43346959 (+) | True | G7441 |
| TU9208 | lncRNA | downstream | 855181 | 43591750 ~ 43595078 (+) | True | G7485 |
| TU9307 | lncRNA | downstream | 1341776 | 44078345 ~ 44081355 (+) | False | G7569 |
| TU9305 | lncRNA | downstream | 1346529 | 44083098 ~ 44088037 (+) | True | G7569 |
| AMCG00004315 | mRNA | upstream | 97848 | 42591866 ~ 42634968 (+) | True | AMCG00004315 |
| AMCG00004314 | mRNA | upstream | 156258 | 42548340 ~ 42576558 (+) | True | AMCG00004314 |
| AMCG00004308 | mRNA | upstream | 377416 | 42350231 ~ 42355400 (+) | True | AMCG00004308 |
| AMCG00004309 | mRNA | upstream | 385734 | 42338514 ~ 42347082 (+) | True | AMCG00004309 |
| AMCG00004305 | mRNA | upstream | 473075 | 42220020 ~ 42259741 (+) | True | AMCG00004305 |
| AMCG00004321 | mRNA | downstream | 190499 | 42927068 ~ 42975785 (+) | True | AMCG00004321 |
| AMCG00004326 | mRNA | downstream | 377115 | 43113684 ~ 43114271 (+) | True | AMCG00004326 |
| AMCG00004328 | mRNA | downstream | 420499 | 43157068 ~ 43177059 (+) | True | AMCG00004328 |
| AMCG00004327 | mRNA | downstream | 479537 | 43216106 ~ 43234293 (+) | True | AMCG00004327 |
| AMCG00004331 | mRNA | downstream | 559083 | 43295652 ~ 43317408 (+) | True | AMCG00004331 |
| TU9000 | other | upstream | 41707 | 42688779 ~ 42691109 (+) | True | G7329 |
| TU8899 | other | upstream | 516454 | 42212510 ~ 42216362 (+) | False | AMCG00004304 |
| TU8679 | other | upstream | 1225585 | 41459576 ~ 41507231 (+) | True | G7094 |
| TU7800 | other | upstream | 5732658 | 36999357 ~ 37000158 (+) | True | G6369 |
| TU7756 | other | upstream | 5841070 | 36861547 ~ 36891746 (+) | True | G6328 |
| TU9559 | other | downstream | 3225441 | 45962010 ~ 45968306 (+) | True | AMCG00004380 |
| TU9841 | other | downstream | 5410319 | 48146888 ~ 48147156 (+) | True | G7999 |
| TU9962 | other | downstream | 6195881 | 48932450 ~ 48934095 (+) | True | G8099 |
| TU10340 | other | downstream | 7414695 | 50151264 ~ 50157719 (+) | True | G8377 |
| TU10527 | other | downstream | 8007222 | 50743791 ~ 50753349 (+) | False | AMCG00004477 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00034881 | False | 2371 | mRNA | 0.44 | 10 | NC_007131.7 | 40457599 ~ 40472519 (+) |
| grasscarp (Ctenopharyngodon idella) | CI01000029_02583370_02587687.mRNA | True | 1351 | mRNA | 0.51 | 9 | CI01000029 | 2583370 ~ 2587697 (+) |
