RNA id: AMCG00004326



Basic Information


Item Value
RNA id AMCG00004326
length 588
RNA type mRNA
GC content 0.60
exon number 1
gene id AMCG00004326
representative True

Chromosome Information


Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 43113684 ~ 43114271 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCCAGCAGCGACTCTCTTGCCTTTCACAGCCACCCCGAGCAGGAAGTCTGCGAGCCCCAGCGTCTTTCGGCTGACGGAGaaattcattttacttttagttttcAGTGCTTTTATCACCCTGTGCTTCGGGGCGATCTTCTTCCTGCCGGACTCCTCCAAGCTGCGCGTTTTCTTCCACTCGTCCTCGGTGGAGGCGGACCCCGGCAAGACAGGTACGGAGAACGAGTCCGTCGTCGGCGGAGCGGGGGACGAGGAGCCCAAGTTGGCCAAGATACGGAGAGACCACGACAATGCGCTGAAGGAGGCGACGGACACCCTCCAGAAGCAGCCGGGGGATATCAAGAAGGAGATCCAGAGCGAGAAGGATAAACTGCCCCATGACGGTGCGGGCAAAGGGGGCAAGGGCAGCCTACCCCATATTGAGTATCAGAGGCCCCCGGGGGCTGCGGGGCGTGAACCTCCAGACCCGGAAACCAGGGAGAGGAGGGCGAAGATCAAGGAGGTGAGTCCGGCTGACCTGCGCGCCTCCTCGGTGGCTGGGCCAGCTCGTCGCCGAACCGGTTTAACGGGTTTTAAAAACGACTGA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU8944 lncRNA upstream 637798 42475576 ~ 42475886 (+) True G7293
TU8939 lncRNA upstream 733723 42376625 ~ 42379961 (+) True G7288
TU8928 lncRNA upstream 748030 42364868 ~ 42365654 (+) True G7278
TU8918 lncRNA upstream 777041 42333425 ~ 42336643 (+) True G7272
TU8872 lncRNA upstream 1024031 42087791 ~ 42089653 (+) True G7231
TU9117 lncRNA downstream 121547 43235818 ~ 43237653 (+) True G7418
TU9148 lncRNA downstream 232079 43346350 ~ 43346959 (+) True G7441
TU9208 lncRNA downstream 477479 43591750 ~ 43595078 (+) True G7485
TU9307 lncRNA downstream 964074 44078345 ~ 44081355 (+) False G7569
TU9305 lncRNA downstream 968827 44083098 ~ 44088037 (+) True G7569
AMCG00004321 mRNA upstream 137899 42927068 ~ 42975785 (+) True AMCG00004321
AMCG00004318 mRNA upstream 377115 42732816 ~ 42736569 (+) True AMCG00004318
AMCG00004315 mRNA upstream 478716 42591866 ~ 42634968 (+) True AMCG00004315
AMCG00004314 mRNA upstream 537126 42548340 ~ 42576558 (+) True AMCG00004314
AMCG00004308 mRNA upstream 758284 42350231 ~ 42355400 (+) True AMCG00004308
AMCG00004328 mRNA downstream 42797 43157068 ~ 43177059 (+) True AMCG00004328
AMCG00004327 mRNA downstream 101835 43216106 ~ 43234293 (+) True AMCG00004327
AMCG00004331 mRNA downstream 181381 43295652 ~ 43317408 (+) True AMCG00004331
AMCG00004330 mRNA downstream 215101 43329372 ~ 43338860 (+) True AMCG00004330
AMCG00004329 mRNA downstream 236508 43350779 ~ 43362687 (+) True AMCG00004329
TU9000 other upstream 422575 42688779 ~ 42691109 (+) True G7329
TU8899 other upstream 897322 42212510 ~ 42216362 (+) False AMCG00004304
TU8679 other upstream 1606453 41459576 ~ 41507231 (+) True G7094
TU7800 other upstream 6113526 36999357 ~ 37000158 (+) True G6369
TU7756 other upstream 6221938 36861547 ~ 36891746 (+) True G6328
TU9559 other downstream 2847739 45962010 ~ 45968306 (+) True AMCG00004380
TU9841 other downstream 5032617 48146888 ~ 48147156 (+) True G7999
TU9962 other downstream 5818179 48932450 ~ 48934095 (+) True G8099
TU10340 other downstream 7036993 50151264 ~ 50157719 (+) True G8377
TU10527 other downstream 7629520 50743791 ~ 50753349 (+) False AMCG00004477

Expression Profile