Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00004327 |
| length | 900 |
| RNA type | mRNA |
| GC content | 0.55 |
| exon number | 6 |
| gene id | AMCG00004327 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030121.1 |
| NCBI id | CM030121.1 |
| chromosome length | 57050121 |
| location | 43216106 ~ 43234293 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0005509 | calcium ion binding | molecular_function |
| GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | molecular_function |
| id | description |
|---|---|
| K01230 | MAN1A_C, MNS1_2; mannosyl-oligosaccharide alpha-1,2-mannosidase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU8944 | lncRNA | upstream | 740220 | 42475576 ~ 42475886 (+) | True | G7293 |
| TU8939 | lncRNA | upstream | 836145 | 42376625 ~ 42379961 (+) | True | G7288 |
| TU8928 | lncRNA | upstream | 850452 | 42364868 ~ 42365654 (+) | True | G7278 |
| TU8918 | lncRNA | upstream | 879463 | 42333425 ~ 42336643 (+) | True | G7272 |
| TU8872 | lncRNA | upstream | 1126453 | 42087791 ~ 42089653 (+) | True | G7231 |
| TU9117 | lncRNA | downstream | 1525 | 43235818 ~ 43237653 (+) | True | G7418 |
| TU9148 | lncRNA | downstream | 112057 | 43346350 ~ 43346959 (+) | True | G7441 |
| TU9208 | lncRNA | downstream | 357457 | 43591750 ~ 43595078 (+) | True | G7485 |
| TU9307 | lncRNA | downstream | 844052 | 44078345 ~ 44081355 (+) | False | G7569 |
| TU9305 | lncRNA | downstream | 848805 | 44083098 ~ 44088037 (+) | True | G7569 |
| AMCG00004328 | mRNA | upstream | 39047 | 43157068 ~ 43177059 (+) | True | AMCG00004328 |
| AMCG00004326 | mRNA | upstream | 101835 | 43113684 ~ 43114271 (+) | True | AMCG00004326 |
| AMCG00004321 | mRNA | upstream | 240321 | 42927068 ~ 42975785 (+) | True | AMCG00004321 |
| AMCG00004318 | mRNA | upstream | 479537 | 42732816 ~ 42736569 (+) | True | AMCG00004318 |
| AMCG00004315 | mRNA | upstream | 581138 | 42591866 ~ 42634968 (+) | True | AMCG00004315 |
| AMCG00004331 | mRNA | downstream | 61359 | 43295652 ~ 43317408 (+) | True | AMCG00004331 |
| AMCG00004330 | mRNA | downstream | 95079 | 43329372 ~ 43338860 (+) | True | AMCG00004330 |
| AMCG00004329 | mRNA | downstream | 116486 | 43350779 ~ 43362687 (+) | True | AMCG00004329 |
| AMCG00004332 | mRNA | downstream | 146377 | 43380670 ~ 43411096 (+) | True | AMCG00004332 |
| AMCG00004335 | mRNA | downstream | 292687 | 43526980 ~ 43534658 (+) | True | AMCG00004335 |
| TU9000 | other | upstream | 524997 | 42688779 ~ 42691109 (+) | True | G7329 |
| TU8899 | other | upstream | 999744 | 42212510 ~ 42216362 (+) | False | AMCG00004304 |
| TU8679 | other | upstream | 1708875 | 41459576 ~ 41507231 (+) | True | G7094 |
| TU7800 | other | upstream | 6215948 | 36999357 ~ 37000158 (+) | True | G6369 |
| TU7756 | other | upstream | 6324360 | 36861547 ~ 36891746 (+) | True | G6328 |
| TU9559 | other | downstream | 2727717 | 45962010 ~ 45968306 (+) | True | AMCG00004380 |
| TU9841 | other | downstream | 4912595 | 48146888 ~ 48147156 (+) | True | G7999 |
| TU9962 | other | downstream | 5698157 | 48932450 ~ 48934095 (+) | True | G8099 |
| TU10340 | other | downstream | 6916971 | 50151264 ~ 50157719 (+) | True | G8377 |
| TU10527 | other | downstream | 7509498 | 50743791 ~ 50753349 (+) | False | AMCG00004477 |
