Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00006074 |
| length | 1502 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 5 |
| gene id | AMCG00006074 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030142.1 |
| NCBI id | CM030142.1 |
| chromosome length | 21087710 |
| location | 15753228 ~ 15766640 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0015031 | protein transport | biological_process |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07882 | RAB3A; Ras-related protein Rab-3A |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU196592 | lncRNA | upstream | 147349 | 15561603 ~ 15605879 (+) | True | G156082 |
| TU196547 | lncRNA | upstream | 321289 | 15430476 ~ 15431939 (+) | True | G156042 |
| TU196456 | lncRNA | upstream | 566003 | 15185874 ~ 15187225 (+) | True | G155974 |
| TU196406 | lncRNA | upstream | 642053 | 15109593 ~ 15111175 (+) | True | G155934 |
| TU196405 | lncRNA | upstream | 644032 | 15107994 ~ 15109196 (+) | True | G155933 |
| TU196665 | lncRNA | downstream | 11559 | 15778199 ~ 15812111 (+) | True | G156130 |
| TU196694 | lncRNA | downstream | 66439 | 15833079 ~ 15833294 (+) | True | G156155 |
| TU196744 | lncRNA | downstream | 266321 | 16032961 ~ 16035969 (+) | False | AMCG00006111 |
| TU196847 | lncRNA | downstream | 697368 | 16464008 ~ 16467676 (+) | True | G156279 |
| TU196875 | lncRNA | downstream | 738130 | 16504770 ~ 16505206 (+) | True | G156302 |
| AMCG00006073 | mRNA | upstream | 8076 | 15726670 ~ 15745152 (+) | True | AMCG00006073 |
| AMCG00006061 | mRNA | upstream | 112750 | 15640272 ~ 15640478 (+) | True | AMCG00006061 |
| AMCG00006059 | mRNA | upstream | 138797 | 15608699 ~ 15614431 (+) | True | AMCG00006059 |
| AMCG00006060 | mRNA | upstream | 149379 | 15602932 ~ 15603849 (+) | True | AMCG00006060 |
| AMCG00006065 | mRNA | upstream | 168581 | 15578244 ~ 15584647 (+) | False | AMCG00006065 |
| AMCG00006106 | mRNA | downstream | 139549 | 15906189 ~ 15918591 (+) | True | AMCG00006106 |
| AMCG00006105 | mRNA | downstream | 157989 | 15924629 ~ 15926560 (+) | True | AMCG00006105 |
| AMCG00006104 | mRNA | downstream | 180568 | 15947208 ~ 15957100 (+) | True | AMCG00006104 |
| AMCG00006107 | mRNA | downstream | 197810 | 15964450 ~ 15988775 (+) | True | AMCG00006107 |
| AMCG00006111 | mRNA | downstream | 266252 | 16032892 ~ 16035958 (+) | True | AMCG00006111 |
| TU196591 | other | upstream | 168467 | 15578084 ~ 15584761 (+) | True | AMCG00006065 |
| TU196404 | other | upstream | 645494 | 15107209 ~ 15107734 (+) | True | G155932 |
| TU196402 | other | upstream | 647661 | 15103456 ~ 15105567 (+) | True | AMCG00006092 |
| TU196155 | other | upstream | 1369648 | 14375995 ~ 14383580 (+) | True | AMCG00006009 |
| TU196053 | other | upstream | 1643358 | 14108173 ~ 14109870 (+) | True | G155638 |
| TU196746 | other | downstream | 197793 | 15964433 ~ 15973006 (+) | False | AMCG00006107 |
| TU196781 | other | downstream | 287395 | 16054035 ~ 16059830 (+) | False | AMCG00006113 |
| TU196796 | other | downstream | 373904 | 16140544 ~ 16144623 (+) | False | AMCG00006089 |
| TU196902 | other | downstream | 861153 | 16627793 ~ 16629182 (+) | True | G156327 |
| TU197026 | other | downstream | 1356565 | 17123205 ~ 17127554 (+) | False | AMCG00006149 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00006328 | True | 814 | mRNA | 0.50 | 5 | NC_007122.7 | 6819050 ~ 6850593 (+) |
| grasscarp (Ctenopharyngodon idella) | CI01000057_04443549_04450402.mRNA | True | 1399 | mRNA | 0.42 | 4 | CI01000057 | 4443549 ~ 4451138 (+) |
