RNA id: AMCG00006967


Basic Information

Item Value
RNA id AMCG00006967
length 711
RNA type mRNA
GC content 0.44
exon number 6
gene id AMCG00006967
representative True

Chromosome Information

Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 29168563 ~ 29257106 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

AAGTGGGGAGATCACTTATCAGAAGAGGAGCAAACAGAGGCAGAAACACTGTATAGAAAATATGGATACAATGTGTTTCTAAGTGACAGGCTGCCGCTGAATAGAACACTTCCTGAAACCAGGAACCCCAGATGCTTGGAGAAAAAATATCCCAACGATCTCCCTACTATCAGTGTggtgttgatttatttgaatgaagCCCTGTCTGTAATGAAGAGAGCCATTCGCAGCATCATTGACAGAACACCAGCGCATCTGCTGAAGGAGATTGTGCTTATCGATGACCACAGTACAAATGAGGACCTGAAAGGGGAGTTTGATGAGTACATCAGTGTGATAAACAAGCTGCACCCAGGACTGGTGAAGAAAGTCACACACAGTGAGCAGCTGGGGCTTACTCAGGCACGGATCTCTGGGTGGAAAGCTTCAACAGGTGATGTGGTGGCGGTTTTGGATGCCCATATTGAAGTCCATGTGGAATGGAGCCCCTCAGTTATGGGTATCTTTATTGCAGACAGAAAATTCTTTGGAGAAATTGGTGTTTTAGATGGTGGAATGAAAATCTATGGTGGAGAAAATGTAGAACTGGGTCTTCGAtctgAAAAACGGCTCCACGAGTTTGAAGACGAACTCACCAAGGCAGAACACTCTGATTATCAGAGAAAAGATCATAGGAATTTCTACTACTAtttctactgctactactattag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU142623 lncRNA downstream 93764 29072181 ~ 29074799 (-) True G113905
TU142594 lncRNA downstream 300743 28863879 ~ 28867820 (-) True G113876
TU142539 lncRNA downstream 527126 28641129 ~ 28641437 (-) True G113823
TU142514 lncRNA downstream 760724 28407406 ~ 28407839 (-) True G113799
TU142419 lncRNA downstream 1092272 28059128 ~ 28076291 (-) False G113724
AMCG00006960 mRNA downstream 135666 29027412 ~ 29032897 (-) True AMCG00006960
AMCG00006959 mRNA downstream 202039 28931030 ~ 28966524 (-) True AMCG00006959
AMCG00006958 mRNA downstream 262352 28902341 ~ 28906211 (-) True AMCG00006958
AMCG00006956 mRNA downstream 276070 28880317 ~ 28892493 (-) True AMCG00006956
AMCG00006957 mRNA downstream 299637 28867902 ~ 28868926 (-) True AMCG00006957
TU142549 other downstream 356015 28711219 ~ 28812548 (-) True G113833
TU142485 other downstream 875965 28267262 ~ 28292598 (-) False G113775
TU142484 other downstream 875965 28291455 ~ 28292598 (-) True G113775
TU142323 other downstream 1641215 27402600 ~ 27527348 (-) True G113645
TU142176 other downstream 2667882 26500015 ~ 26500681 (-) True G113530

Expression Profile