RNA id: AMCG00007487


Basic Information

Item Value
RNA id AMCG00007487
length 267
RNA type mRNA
GC content 0.58
exon number 2
gene id AMCG00007487
representative False

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 19915146 ~ 19923153 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGTGCTGAAGTTCAAGTGGGAGGGCAACGCAGTGTGGGCGCACATCTGGAACAAGATGCAGACCATAATGCCCTGGAGGAAAGGACAGAGGGGACCGGAGCTGACTGTGGGCAAAATCCGGGTCAAGGCCGGGGAGACCCAGCAGAAgacGTCCTTCTGCTCCCAGAATGACGATCAGATGCAGTTGCAGCCGTCGCAGGAGAAGGTGTTTGTGCGCTGTGAGGGCAGGAGGGACGGGCACCGGAAGAGGAAAATCAgtgactga

Function

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0005576 extracellular region cellular_component
GO:0004806 triglyceride lipase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU30194 lncRNA downstream 4185 19867858 ~ 19912916 (-) True G24102
TU30182 lncRNA downstream 119525 19791701 ~ 19797576 (-) True AMCG00007481
TU30064 lncRNA downstream 337117 19579781 ~ 19579984 (-) True G24003
TU30035 lncRNA downstream 436014 19480014 ~ 19481087 (-) True G23982
TU29891 lncRNA downstream 1015504 18901365 ~ 18901597 (-) True G23875
TU30293 lncRNA upstream 287870 20211019 ~ 20222004 (-) False AMCG00007494
TU30294 lncRNA upstream 287870 20211019 ~ 20222004 (-) True AMCG00007494
TU30296 lncRNA upstream 287870 20211019 ~ 20222004 (-) False AMCG00007494
TU30336 lncRNA upstream 365374 20288523 ~ 20288842 (-) True G24213
TU30339 lncRNA upstream 407551 20330700 ~ 20330902 (-) True G24216
AMCG00007480 mRNA downstream 99035 19800374 ~ 19818066 (-) True AMCG00007480
AMCG00007481 mRNA downstream 117349 19792700 ~ 19799752 (-) False AMCG00007481
AMCG00007479 mRNA downstream 165306 19724207 ~ 19751795 (-) True AMCG00007479
AMCG00007477 mRNA downstream 199305 19714193 ~ 19717796 (-) True AMCG00007477
AMCG00007474 mRNA downstream 264258 19643953 ~ 19652843 (-) True AMCG00007474
AMCG00007485 mRNA upstream 2288 19925437 ~ 19929389 (-) True AMCG00007485
AMCG00007486 mRNA upstream 10987 19934136 ~ 19941835 (-) True AMCG00007486
AMCG00007484 mRNA upstream 20706 19943855 ~ 19957453 (-) True AMCG00007484
AMCG00007492 mRNA upstream 105983 20029132 ~ 20032795 (-) True AMCG00007492
AMCG00007491 mRNA upstream 111546 20034695 ~ 20053654 (-) True AMCG00007491
TU29846 other downstream 1139463 18776360 ~ 18777638 (-) True G23838
TU29633 other downstream 1858152 18055470 ~ 18058949 (-) True G23661
TU29265 other downstream 3295196 16530174 ~ 16621905 (-) False AMCG00007375
TU29239 other downstream 3594450 16320997 ~ 16322651 (-) False AMCG00007365
TU30340 other upstream 408364 20331513 ~ 20331811 (-) True G24217
TU30382 other upstream 547962 20471111 ~ 20472704 (-) True AMCG00007500
TU31390 other upstream 4048522 23971671 ~ 23972665 (-) True G25026
TU31562 other upstream 4342675 24265824 ~ 24267921 (-) False AMCG00007637
TU31883 other upstream 5341183 25264332 ~ 25264951 (-) True G25422

Expression Profile