RNA id: AMCG00011214


Basic Information

Item Value
RNA id AMCG00011214
length 372
RNA type mRNA
GC content 0.56
exon number 1
gene id AMCG00011214
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 14196535 ~ 14196906 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCCTCCCCTGCCAGTCCGAAGGACAGCTTCTCGTCGGACGAGGATATCCGATCAGAGTCGATGGCCAAGGAGCGCAAAGTCCAGGTGTCCAGCTTACCTTTCAGCGTGGACGCGCTGATGGCGGACAGAAAGACGCACGTCCAGTGTCCACCGACATCGGAAGGGACTATGCTTGGCAACCCCAGGACACACAGTTCTCTGTCCATTTCCAGAGACACTTACAGCCCCGAGGAATTTCCCAAGCACTTTGTCCCAACGTCCCCCGTTAAATCCGACACAGACCCAGAGGACTGCGCTCCTTGGGTCACCGGTTCCAGATTCTCGCCCCCGCCGCGTAAGTATCCACTTGCGCCAGAACAATATTCATAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131410 lncRNA upstream 125566 14070400 ~ 14070969 (+) True G105051
TU131405 lncRNA upstream 133378 14062700 ~ 14063157 (+) True G105046
TU131391 lncRNA upstream 135511 14013121 ~ 14061024 (+) False AMCG00011209
TU131374 lncRNA upstream 203690 13990955 ~ 13992845 (+) True AMCG00011210
TU131317 lncRNA upstream 320357 13868402 ~ 13876178 (+) False AMCG00011204
TU131438 lncRNA downstream 22044 14218950 ~ 14262016 (+) True G105078
TU131476 lncRNA downstream 259196 14456102 ~ 14459018 (+) True G105113
TU131518 lncRNA downstream 467714 14664620 ~ 14665153 (+) True G105143
TU131519 lncRNA downstream 473813 14670719 ~ 14670928 (+) True G105144
TU131520 lncRNA downstream 474392 14671298 ~ 14671549 (+) True G105145
AMCG00011213 mRNA upstream 100482 14095155 ~ 14096053 (+) True AMCG00011213
AMCG00011212 mRNA upstream 120118 14072368 ~ 14076417 (+) True AMCG00011212
AMCG00011209 mRNA upstream 135508 14037104 ~ 14061027 (+) True AMCG00011209
AMCG00011210 mRNA upstream 204608 13985665 ~ 13991927 (+) False AMCG00011210
AMCG00011206 mRNA upstream 282349 13909732 ~ 13914186 (+) True AMCG00011206
AMCG00011217 mRNA downstream 90850 14287756 ~ 14305622 (+) True AMCG00011217
AMCG00011215 mRNA downstream 169534 14366440 ~ 14379806 (+) True AMCG00011215
AMCG00011219 mRNA downstream 199876 14396782 ~ 14411016 (+) True AMCG00011219
AMCG00011220 mRNA downstream 222822 14419728 ~ 14426630 (+) True AMCG00011220
AMCG00011218 mRNA downstream 230573 14427479 ~ 14449677 (+) True AMCG00011218
TU131073 other upstream 1253453 12942380 ~ 12943082 (+) True G104815
TU130962 other upstream 1577480 12610129 ~ 12619055 (+) True G104719
TU130924 other upstream 1669504 12525360 ~ 12527031 (+) True G104694
TU130727 other upstream 2129198 12066494 ~ 12067337 (+) True G104550
TU130558 other upstream 2352446 11842129 ~ 11844089 (+) True G104435
TU131514 other downstream 422784 14619690 ~ 14620534 (+) True G105139
TU131632 other downstream 1123874 15320780 ~ 15322425 (+) False AMCG00011241
TU131792 other downstream 1653740 15850646 ~ 15852389 (+) True AMCG00011253
TU131793 other downstream 1656858 15853764 ~ 15855784 (+) True AMCG00011252
TU131803 other downstream 1766434 15963340 ~ 15984079 (+) True G105373

Expression Profile