RNA id: TU128784


Basic Information

Item Value
RNA id TU128784
length 211
lncRNA type inter_gene
GC content 0.54
exon number 2
gene id G103087
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4138620 ~ 4139637 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GGCGCTTGATCGTTGCCCGGTCCCTCATGTTGCTTCCTCCAGCACCCTTGGGCCGATCCGGGttactgctggatgaagaggTGTTGATGGTGCTCCTCCCCTTGTACTGTGGCTTCACCATGTTGCCGATCTGTTGTCAGACAACACCGCCGAGGAAAAGGTGACAATAAGCGTTTATTTCGTGGATCTGAAAACTTATTTTCCTCCGGCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128741 lncRNA downstream 353989 3784257 ~ 3784631 (-) True G103050
TU128714 lncRNA downstream 579227 3554183 ~ 3559393 (-) False AMCG00010901
TU128685 lncRNA downstream 713851 3420888 ~ 3424769 (-) True G103006
TU128569 lncRNA downstream 868851 3268542 ~ 3269769 (-) True G102920
TU128513 lncRNA downstream 977108 3161097 ~ 3161512 (-) True G102890
TU128793 lncRNA upstream 10862 4150499 ~ 4150917 (-) True G103094
TU128794 lncRNA upstream 12881 4152518 ~ 4152748 (-) True G103095
TU128853 lncRNA upstream 285717 4425354 ~ 4425572 (-) True G103149
TU128989 lncRNA upstream 976078 5115715 ~ 5129141 (-) True AMCG00010937
TU128990 lncRNA upstream 976078 5115715 ~ 5124287 (-) False AMCG00010937
AMCG00010910 mRNA downstream 79891 4028802 ~ 4058729 (-) True AMCG00010910
AMCG00010909 mRNA downstream 117699 4015598 ~ 4020921 (-) True AMCG00010909
AMCG00010904 mRNA downstream 527075 3592656 ~ 3611545 (-) True AMCG00010904
AMCG00010902 mRNA downstream 550525 3577231 ~ 3588095 (-) True AMCG00010902
AMCG00010901 mRNA downstream 563805 3553986 ~ 3574815 (-) True AMCG00010901
AMCG00010914 mRNA upstream 15394 4155031 ~ 4167037 (-) True AMCG00010914
AMCG00010917 mRNA upstream 150419 4290056 ~ 4291183 (-) True AMCG00010917
AMCG00010919 mRNA upstream 417916 4557553 ~ 4569654 (-) True AMCG00010919
AMCG00010921 mRNA upstream 434679 4574316 ~ 4575551 (-) True AMCG00010921
AMCG00010920 mRNA upstream 441214 4580851 ~ 4589405 (-) True AMCG00010920
TU128662 other downstream 719444 3320813 ~ 3419176 (-) False G102990
TU128666 other downstream 719444 3416368 ~ 3419176 (-) True G102990
TU128675 other downstream 811061 3325858 ~ 3327559 (-) False AMCG00010895
TU128533 other downstream 956001 3179970 ~ 3182619 (-) True G102902
TU128350 other downstream 1377356 2758478 ~ 2761264 (-) True G102774
TU128814 other upstream 30156 4169793 ~ 4185974 (-) True G103112
TU128916 other upstream 503015 4642652 ~ 4650106 (-) True AMCG00010925
TU128994 other upstream 994573 5134210 ~ 5140456 (-) False AMCG00010939
TU129184 other upstream 1565133 5704770 ~ 5748564 (-) True G103395
TU129762 other upstream 3831987 7971624 ~ 8019522 (-) False G103832

Expression Profile