RNA id: TU128794


Basic Information

Item Value
RNA id TU128794
length 231
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G103095
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 4152518 ~ 4152748 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CTGACACTCATACACTCTATATAGCGAGATGCTGAGACTCATACAATATATACCGAGACGCTGAGActtatacactacatactgagacttAAACACTATACACAGAGATGataagacacacacaatatatgcaGAGATGCTGagacatatacattatatattgaGATGCTGAGACTTAGACACTATATATACCGAGATGCTGAgacatatacactatatattgaAATGCTG

Function

GO:

id name namespace
GO:0009799 specification of symmetry biological_process
GO:0007507 heart development biological_process
GO:0009855 determination of bilateral symmetry biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0061371 determination of heart left/right asymmetry biological_process

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU128793 lncRNA downstream 1601 4150499 ~ 4150917 (-) True G103094
TU128784 lncRNA downstream 12881 4138620 ~ 4139637 (-) True G103087
TU128741 lncRNA downstream 367887 3784257 ~ 3784631 (-) True G103050
TU128714 lncRNA downstream 593125 3554183 ~ 3559393 (-) False AMCG00010901
TU128685 lncRNA downstream 727749 3420888 ~ 3424769 (-) True G103006
TU128853 lncRNA upstream 272606 4425354 ~ 4425572 (-) True G103149
TU128989 lncRNA upstream 962967 5115715 ~ 5129141 (-) True AMCG00010937
TU128990 lncRNA upstream 962967 5115715 ~ 5124287 (-) False AMCG00010937
TU129052 lncRNA upstream 1131582 5284330 ~ 5291900 (-) True AMCG00010946
TU129054 lncRNA upstream 1178984 5331732 ~ 5334257 (-) True G103309
AMCG00010910 mRNA downstream 93789 4028802 ~ 4058729 (-) True AMCG00010910
AMCG00010909 mRNA downstream 131597 4015598 ~ 4020921 (-) True AMCG00010909
AMCG00010904 mRNA downstream 540973 3592656 ~ 3611545 (-) True AMCG00010904
AMCG00010902 mRNA downstream 564423 3577231 ~ 3588095 (-) True AMCG00010902
AMCG00010901 mRNA downstream 577703 3553986 ~ 3574815 (-) True AMCG00010901
AMCG00010914 mRNA upstream 2283 4155031 ~ 4167037 (-) True AMCG00010914
AMCG00010917 mRNA upstream 137308 4290056 ~ 4291183 (-) True AMCG00010917
AMCG00010919 mRNA upstream 404805 4557553 ~ 4569654 (-) True AMCG00010919
AMCG00010921 mRNA upstream 421568 4574316 ~ 4575551 (-) True AMCG00010921
AMCG00010920 mRNA upstream 428103 4580851 ~ 4589405 (-) True AMCG00010920
TU128662 other downstream 733342 3320813 ~ 3419176 (-) False G102990
TU128666 other downstream 733342 3416368 ~ 3419176 (-) True G102990
TU128675 other downstream 824959 3325858 ~ 3327559 (-) False AMCG00010895
TU128533 other downstream 969899 3179970 ~ 3182619 (-) True G102902
TU128350 other downstream 1391254 2758478 ~ 2761264 (-) True G102774
TU128814 other upstream 17045 4169793 ~ 4185974 (-) True G103112
TU128916 other upstream 489904 4642652 ~ 4650106 (-) True AMCG00010925
TU128994 other upstream 981462 5134210 ~ 5140456 (-) False AMCG00010939
TU129184 other upstream 1552022 5704770 ~ 5748564 (-) True G103395
TU129762 other upstream 3818876 7971624 ~ 8019522 (-) False G103832

Expression Profile