RNA id: TU168606



Basic Information


Item Value
RNA id TU168606
length 259
lncRNA type inter_gene
GC content 0.45
exon number 3
gene id G134339
representative True

Chromosome Information


Item Value
chromosome id CM030138.1
NCBI id CM030138.1
chromosome length 24262032
location 10199151 ~ 10200970 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


aaactatatatgtTGCTAACTCCTCTGCTACAGAGTTCTGTGCACATTAATCTCAGCTGTCAATCATGATCCTAACTGTGATATTCATTGCAGCGAGTTTACAATgtGTTCAGTCCCAGATCGTGCTGACTGAGTCTGAGGCAGCAGTTAAAAAGCCTGGAGAATCCCACACATTGTCCTGTACAGGACAATGTGTGGGATTCTCCAAGCTTTTTAACAGCTGCCTCAGACTCAGTCAGCACGATCTGGGACTGAACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU168619 lncRNA upstream 18444 9958351 ~ 10180707 (+) False G134350
TU168621 lncRNA upstream 21923 9958351 ~ 10177228 (+) True G134350
TU168608 lncRNA upstream 252662 9927912 ~ 9946489 (+) True G134341
TU168614 lncRNA upstream 253411 9886858 ~ 9945740 (+) True G134346
TU168586 lncRNA upstream 276134 9847522 ~ 9923017 (+) True G134335
TU168654 lncRNA downstream 68710 10269680 ~ 10270054 (+) True G134378
TU168804 lncRNA downstream 393879 10594849 ~ 10595406 (+) True G134495
TU168807 lncRNA downstream 397569 10598539 ~ 10598841 (+) True G134498
TU168833 lncRNA downstream 432538 10633508 ~ 10684097 (+) True AMCG00012088
TU168877 lncRNA downstream 648888 10849858 ~ 10853291 (+) True G134556
AMCG00012078 mRNA upstream 98695 10098148 ~ 10100456 (+) True AMCG00012078
AMCG00012079 mRNA upstream 124409 10067556 ~ 10074742 (+) True AMCG00012079
AMCG00012074 mRNA upstream 182960 10014844 ~ 10016191 (+) True AMCG00012074
AMCG00012076 mRNA upstream 195060 9999738 ~ 10004091 (+) True AMCG00012076
AMCG00012075 mRNA upstream 199422 9979890 ~ 9999729 (+) True AMCG00012075
AMCG00012082 mRNA downstream 64130 10265100 ~ 10280532 (+) True AMCG00012082
AMCG00012083 mRNA downstream 137858 10338828 ~ 10353743 (+) True AMCG00012083
AMCG00012084 mRNA downstream 162986 10363956 ~ 10392598 (+) True AMCG00012084
AMCG00012087 mRNA downstream 342443 10543413 ~ 10545945 (+) True AMCG00012087
AMCG00012086 mRNA downstream 350700 10551670 ~ 10564853 (+) True AMCG00012086
TU168639 other upstream 58694 10139954 ~ 10140457 (+) True G134366
TU168638 other upstream 64559 10134027 ~ 10134592 (+) True G134365
TU168629 other upstream 164458 10034186 ~ 10034693 (+) True G134357
TU168607 other upstream 262740 9935926 ~ 9936411 (+) True G134340
TU168605 other upstream 332008 9852890 ~ 9867143 (+) True G134338
TU168604 other downstream 22034 10223004 ~ 10259224 (+) True G134337
TU168648 other downstream 51840 10252810 ~ 10307839 (+) True G134373
TU168610 other downstream 102303 10303273 ~ 10317818 (+) True G134343
TU168966 other downstream 725636 10926606 ~ 10930453 (+) True G134613
TU169090 other downstream 1041259 11242229 ~ 11290522 (+) False G134697

Expression Profile